DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pmm2 and Pmm2

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_058577.1 Gene:Pmm2 / 54128 MGIID:1859214 Length:242 Species:Mus musculus


Alignment Length:236 Identity:131/236 - (55%)
Similarity:176/236 - (74%) Gaps:3/236 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNEFDFIFPE 76
            |.|||:|||||.||..:|.|.:.|. .:::.:..||:|||||.||:.||| |..::.::|::|||
Mouse     4 LCLFDMDGTLTAPRQKITEEMDGFL-QKLRQKTKIGVVGGSDFEKLQEQL-GNDVVEKYDYVFPE 66

  Fly    77 NGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQ 141
            ||||..:.||.:.||||..||||:.::..||:.|.|::.:.:|.||||||||||||:||.||||.
Mouse    67 NGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRNGMLNVSPIGRS 131

  Fly   142 CTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLRHIEAHY 206
            |::|||..|.|.|.:..:|:|.:.||::|||...||:|||||||.||||.||||.|||||:| |.
Mouse   132 CSQEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISIDVFPEGWDKRYCLRHLE-HA 195

  Fly   207 KFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRI 247
            .:|.|:||||||.|||||:||::||||:.:.|..|:||:||
Mouse   196 GYKTIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRRI 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 131/236 (56%)
Pmm2NP_058577.1 HAD_PMM 4..240 CDD:319784 131/236 (56%)

Return to query results.
Submit another query.