DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pmm2 and yigL

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:YP_026267.1 Gene:yigL / 2847768 ECOCYCID:EG11470 Length:266 Species:Escherichia coli


Alignment Length:245 Identity:49/245 - (20%)
Similarity:91/245 - (37%) Gaps:60/245 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DVDGTLTMPRSVVTPEFEE-----------FFYSRVKPRATIG-IVGGSDLEKMFEQLNGRKILN 68
            |:||||..|...::|..:|           |.::..:....:| |....:::......||.:: :
E. coli     8 DLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARV-H 71

  Fly    69 EFD--FIFPEN----------GLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIK 121
            :.|  .||..|          |:|.       ...:||.::..:. :.|:|   |:..|.....|
E. coli    72 DLDGNLIFAHNLDRDIASDLFGVVN-------DNPDIITNVYRDD-EWFMN---RHRPEEMRFFK 125

  Fly   122 RGTF--IEFRNGMM---NVCPIGRQCTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIG 181
            ...|  ..:..|::   .|..:...|...|:.:..|..|..:..::           |::::|. 
E. coli   126 EAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDR-----------VNVSFST- 178

  Fly   182 GQISFDVFPHGWDKTYCLRHI--EAHYKFKEIHFFGDKTEPGGNDYEIYS 229
             ....:|...|..|.:.|..:  :..|..|:...|||    |.||.|:.|
E. coli   179 -LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGD----GMNDAEMLS 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 49/245 (20%)
yigLYP_026267.1 PRK10976 1..265 CDD:182878 49/245 (20%)

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