DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf2 and otomp

DIOPT Version :9

Sequence 1:NP_524044.1 Gene:Tsf2 / 39435 FlyBaseID:FBgn0036299 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001038552.1 Gene:otomp / 565818 ZFINID:ZDB-GENE-040709-1 Length:371 Species:Danio rerio


Alignment Length:350 Identity:114/350 - (32%)
Similarity:175/350 - (50%) Gaps:18/350 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 CVTSENELDKCIKMRTALKAHLLKPELICKKMHSHINCMQFIEAGKADISVFDAGDVYTGGLNYD 517
            |..|:.|..||:.:.....|..|:.:|:|.:..|..:||:.|:.|.||.|...|.::||.|..|.
Zfish    30 CTVSDAEDQKCLDLAGNATARNLRGQLVCVRGQSPTDCMKQIKNGTADASTMYADEIYTAGFCYG 94

  Fly   518 LVPFMSEVYN-LGEPEYYVVAVAKEDDPDTELTYLKGKNTCHTGINTAAGWTYPMALFISNGWIR 581
            |...:.|.|| :....|||||:|:....|..|..:..:::||.|:.|..|||.|:...::...|.
Zfish    95 LDVAVGESYNGVDGINYYVVALARTSSSDLSLLEMHERSSCHPGMRTTVGWTVPIGFLVNTSQIS 159

  Fly   582 -PYGCDSVRAAAEYFTKSCVPGAISNEYN-TGVPYDSMCDLCHG--TSYRYCRRDASEEYYGHTG 642
             ...|:...|..::|..|||||....|:: .|....::|:.|.|  .....|..:..|.::|..|
Zfish   160 VDVQCNFPHAVGDFFGYSCVPGVKDPEHDPKGNNPRNLCEACIGDENDRHICANNPRERHFGEAG 224

  Fly   643 AFRCLVEGGGHVAFMKHTTVMESTGGKRKEWWARNALNDDFELLCTDGTRAEIQDYKRCNLGKVK 707
            |.||:.|..|.|||:|||||.::..||.:|.||.:...:|.:|||.||:.|.:..::.|:|..|.
Zfish   225 ALRCVAENLGDVAFVKHTTVFDNMQGKNQESWALDLELEDLKLLCPDGSEANLFQHESCHLAVVP 289

  Fly   708 ANAVVTRGGVNYNETQMNAYINLLTYAQQLYGRKEVDAFSFSMFSS-PIGHYDLIFQDATRQLQV 771
            .||||.|     .|.:...| ..|...|..:|.   ....||:||| ..|..|::|.|:|::|..
Zfish   290 TNAVVVR-----LEDKCRVY-KFLERVQNAFGN---TTEGFSLFSSVNYGQPDVLFSDSTKKLLR 345

  Fly   772 IPPNKRRYDAYLGSDFMRARRITDC 796
            :   ...|.::||..:....|..:|
Zfish   346 V---MGTYTSWLGPSYTTILRAFEC 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf2NP_524044.1 PBP2_transferrin 32..372 CDD:270247
PBP2_transferrin 450..792 CDD:270247 112/344 (33%)
TR_FER 452..790 CDD:214514 112/342 (33%)
otompNP_001038552.1 TR_FER 27..363 CDD:214514 112/344 (33%)
PBP2_transferrin 27..363 CDD:270247 112/344 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583236
Domainoid 1 1.000 208 1.000 Domainoid score I2807
eggNOG 1 0.900 - - E1_28KI0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125278at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26146
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.710

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