DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf2 and Inhca

DIOPT Version :10

Sequence 1:NP_524044.1 Gene:Tsf2 / 39435 FlyBaseID:FBgn0036299 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_038937483.1 Gene:Inhca / 315963 RGDID:1310507 Length:715 Species:Rattus norvegicus


Alignment Length:822 Identity:249/822 - (30%)
Similarity:348/822 - (42%) Gaps:190/822 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VALVGA-----LCFTLANAQHHYDEHKTTRMVWCTKSQAEQYKCQNLTVAIERD--RALFDEVFL 65
            |:|.|:     ||..:        ..||.|  ||..|..|..||.:.     ||  :.:......
  Rat    20 VSLPGSHIRNRLCLAV--------PEKTIR--WCIVSDHEATKCSSF-----RDNMKKVLPAGGP 69

  Fly    66 NLTCFMAYSADECIHHIDREKAHITTLDAGDVFTAG-RYNSLIPIMQEKLEGGFAD-----YQSV 124
            .:.|....|..|||..|...|....|:|...|..|. .::||.|||.|..  |..|     |..|
  Rat    70 AVACVRKTSHLECIRDISANKIDAVTVDGALVAEADLPHHSLKPIMAEYY--GSKDDPQTHYYVV 132

  Fly   125 AVIKKGSLPDLNNLRDMRNKRVCFPWVGSLAGWIVPIHTLQREGGMEVVDCNNQVKTAASYFNNS 189
            ||:|||:...||.|   :.|:.|...:|..|||.||:..|...|..|.        .||::|::|
  Rat   133 AVVKKGTGFQLNQL---QGKKSCHASLGWSAGWYVPLSVLLPSGSRET--------AAATFFSSS 186

  Fly   190 CAVYSLSDKHNPIGDNS--DKLCTLCTGKIPGG----RCSSADPYFGYEGAFKCLLE-KGDVAFL 247
            |.         |..|..  .:||.||:||   |    .|||.:|||||.||.|||.: .|||:|:
  Rat   187 CV---------PCADGKMFPRLCQLCSGK---GTDKCSCSSGEPYFGYWGALKCLQDGTGDVSFV 239

  Fly   248 RHSTVNEMLQTTEFKNIAPDTFELLCRDGRRASINDYRQCNWGQVPADAIVTSSARSFSDRKQYQ 312
            ||.||.|::.    :....|.:||||.|..|..:::|.||...:||:..:|   |||...::...
  Rat   240 RHLTVFEVMP----RKADRDQYELLCPDNTRRPVDEYEQCYLARVPSHVVV---ARSVDGKEDSI 297

  Fly   313 QFLKRIAELYSDGTRDDQSRQGGQSFNSRNNINDQNAYGQFDNNDPYRTQNQYDQYRSERLDSSF 377
            |.|.|:|                           |..:|                          
  Rat   298 QELLRVA---------------------------QEHFG-------------------------- 309

  Fly   378 AEERNQQDGTNTSILYEKFRIFESKRYGKPNLLFQDSSRALTVIPEDDQSFTKYLGPAINFIYGI 442
                  :|.::|      |::|.|. :|| :|||.|::..|..:| .......|||  ...:..|
  Rat   310 ------KDKSST------FQLFGSP-HGK-DLLFTDAACGLLRVP-PKMDIGLYLG--YELLSAI 357

  Fly   443 RECPVPA-----MTLCVTSENELDKCIKMRTALKAHLLKPELICKKMHSHINCMQFIEAGKADIS 502
            |.....:     :..|...:.|..||.........     .|.|....:..:|:..:..|:||..
  Rat   358 RNLKRGSEDSRRVKWCAVGQQERAKCDHWSAVSGG-----ALACATEETPEDCIAAVMKGEADAV 417

  Fly   503 VFDAGDVYTGGLNYDLVPFMSEVY--------------NLGEPEYYVVAVAKEDDPDTELTYLKG 553
            ..|.|..|..| :..|||.:.|.|              |.....||||||.|:.|.......|:|
  Rat   418 NLDGGFAYIAG-HCGLVPGLGENYLSPHSSERLGSKCVNAALEGYYVVAVVKKSDVGITWNSLQG 481

  Fly   554 KNTCHTGINTAAGWTYPMALFISNGWIRPYGCDSVRAAAEYFTKSCVPGAISNEYNTGVPYDSMC 618
            |.:|||.:.|:|||..||:|.        |.........|:|:..|.|||        .|...:|
  Rat   482 KKSCHTAVGTSAGWNVPMSLI--------YNQTGSCKFDEFFSGGCAPGA--------NPDSRLC 530

  Fly   619 DLCHGTS--YRYCRRDASEEYYGHTGAFRCLVEGGGHVAFMKHTTVMESTGGKRKEWWARNALND 681
            .||.|.:  ...|..:..|.|:|.:||.||||| .|.||||||.||:::|.||..|.||:...::
  Rat   531 ALCAGGNEPAHMCAANNDEGYHGSSGALRCLVE-KGDVAFMKHPTVLQNTDGKNPESWAKGLKHE 594

  Fly   682 DFELLCTDGTRAEIQDYKRCNLGKVKANAVVTRGGVNYNETQMNAYINLLTYAQQLYGRKEVDAF 746
            ||||||.||||..:.:.:.|:|.:|..:||.:|      :.:::....:|...|:|:||...:..
  Rat   595 DFELLCLDGTRKPVTEAQNCHLDRVPNHAVFSR------KDKVDFVQRMLFNQQELFGRNGFEYR 653

  Fly   747 SFSMFSSPIGHYDLIFQDATRQLQVIPPNKRRYDAYLGSDFM 788
            .|.||.|  .|.||:|.|.|..|..: .||..|..|||..::
  Rat   654 MFQMFES--SHKDLLFSDDTECLSNL-QNKATYKTYLGPQYL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf2NP_524044.1 PBP2_transferrin 32..372 CDD:270247 107/354 (30%)
PBP2_transferrin 450..792 CDD:270247 117/355 (33%)
InhcaXP_038937483.1 PBP2_transferrin_N 39..361 CDD:270336 126/430 (29%)
PBP2_transferrin_C 367..699 CDD:270335 117/358 (33%)

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