DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf2 and Srprb

DIOPT Version :10

Sequence 1:NP_524044.1 Gene:Tsf2 / 39435 FlyBaseID:FBgn0036299 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_033301.1 Gene:Srprb / 20818 MGIID:102964 Length:269 Species:Mus musculus


Alignment Length:135 Identity:30/135 - (22%)
Similarity:57/135 - (42%) Gaps:23/135 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 QYDQYRSERLDSSFAEERNQQDGTNTSIL----YEKFRIFESKRYGKPNLL--FQDSSRALTVIP 422
            ||...::...|||...:.|...|.:.:::    :|..|.         .||  |:.|:||: |..
Mouse    86 QYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRF---------QLLDRFKSSARAV-VFV 140

  Fly   423 EDDQSFTKYLGPAINFIYGIRECPVPAMTLCVTSENELDKCIKMRTALKAHLLKPELICKKMHSH 487
            .|..:|.:.:.....|:|.:.   :.:|.| ..|.:.|..|.|...|:..   ..:||.:::...
Mouse   141 VDSAAFQREVKDVAEFLYQVL---IDSMAL-KNSPSLLIACNKQDIAMAK---SAKLIQQQLEKE 198

  Fly   488 INCMQ 492
            :|.::
Mouse   199 LNTLR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf2NP_524044.1 PBP2_transferrin 32..372 CDD:270247 2/7 (29%)
PBP2_transferrin 450..792 CDD:270247 10/43 (23%)
SrprbNP_033301.1 SR_beta 63..268 CDD:206691 30/135 (22%)

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