DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf2 and depdc5

DIOPT Version :9

Sequence 1:NP_524044.1 Gene:Tsf2 / 39435 FlyBaseID:FBgn0036299 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_004910648.1 Gene:depdc5 / 100498286 XenbaseID:XB-GENE-980707 Length:1608 Species:Xenopus tropicalis


Alignment Length:446 Identity:77/446 - (17%)
Similarity:133/446 - (29%) Gaps:137/446 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YDEH-------KTTRMVWCTKSQAEQYKCQNLTVAIERDRALFDEVFLNLTCFMAYSADECIHHI 82
            :|:|       :|.:|..........::.....:.:.:.|.:.:.:.::|.|.    .::.:|.:
 Frog   343 FDKHYINRNFDRTGQMSVVITPGVGVFQVDRSLMILTKQRMIDNGIGVDLVCM----GEQPLHAV 403

  Fly    83 DREKAHITTLDAGDVFTAGRYN-------SLIPIMQEKLEGGFADYQSVAVIK-------KGSLP 133
            ...|.| .....||......||       |......:.|...|.....:|..|       .|..|
 Frog   404 PLFKLH-NRSSPGDSRLGDDYNIPHWINHSFYTSQSQPLNNSFTPRIKLAPRKTNSEKGRTGKDP 467

  Fly   134 DLNNLRDMRNKRVCFPWVGSLAGWIVPIHT-----------------LQREGGMEVVDCNNQVKT 181
            .:.:.::..|              .:||..                 .||......|. ..||:.
 Frog   468 SIGSPKETEN--------------ALPIQVDYDAYDSQVFRLPGPSRAQRSITFRAVR-ETQVRK 517

  Fly   182 AASYFNNSCAVYSLSDKHNPI------GDNSD-----KLCTLCTGKIPGGRCSSADPYFGYEGAF 235
            ::..::.||:..|     .|.      ..|||     ||..:.....|......|....||... 
 Frog   518 SSCSYDTSCSPVS-----RPFTAEEGRSQNSDESSLGKLSNILLIPRPHLHQYEASSSLGYTST- 576

  Fly   236 KCLLEKGDVAFLRHSTVNEMLQTTEFKNIAPDTFE-------LLCRDG----RRASINDYRQCNW 289
            :..||:             |:::.:..:.||..|.       |..|.|    :||.||.:..   
 Frog   577 RDFLER-------------MIESQQRDSSAPGRFHVGSAESMLHVRPGGYHPQRALINPFAP--- 625

  Fly   290 GQVPADAIVTSSARSFSDR----------KQYQQFLKRIAELYSDGTRDDQ-------------- 330
            .::|..  :||:.|.:...          :.:.|..:.:|||...|.|:..              
 Frog   626 SRMPMK--LTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGMREASHSSAELLELAYHEA 688

  Fly   331 -SRQGGQSFNSRNNINDQNAYGQFDNNDPYRTQNQYDQYRSERLDSSFAEERNQQD 385
             .|..|......|.....|.  :|..|.|...|      |:....|:..|:.:..|
 Frog   689 TGRHSGPRTPGENGSCGSNE--EFSCNTPINGQ------RNHNTGSNHREKESSDD 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf2NP_524044.1 PBP2_transferrin 32..372 CDD:270247 71/417 (17%)
PBP2_transferrin 450..792 CDD:270247
TR_FER 452..790 CDD:214514
depdc5XP_004910648.1 IML1 126..407 CDD:371996 8/67 (12%)
DEP_DEPDC5-like 1184..1267 CDD:239896
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48076
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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