DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf2 and meltf

DIOPT Version :9

Sequence 1:NP_524044.1 Gene:Tsf2 / 39435 FlyBaseID:FBgn0036299 Length:819 Species:Drosophila melanogaster
Sequence 2:XP_002937877.2 Gene:meltf / 100158653 XenbaseID:XB-GENE-968181 Length:723 Species:Xenopus tropicalis


Alignment Length:807 Identity:267/807 - (33%)
Similarity:382/807 - (47%) Gaps:137/807 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 WCTKSQAEQYKCQNLTVAIERDRALFDEVFLN--LTCFMAYSADECIHHIDREKAHITTLDAGDV 97
            |||.|..|..||.::       :|.|.:..:.  |:|....|..:|...|...:|...||:...:
 Frog    23 WCTISDPENKKCNDM-------KAAFGQAKITPMLSCVNGKSGMDCARMIMNNEADAVTLNGELI 80

  Fly    98 FTAGRYNSLIPIMQEKLEGGF-ADYQSVAVIKKGSLPDLNNLRDMRNKRVCFPWVGSLAGWIVPI 161
            :.||...:|.|:..|..:.|. ..|.:|||::|.|...:|||:..::   |.......|||.|||
 Frog    81 YQAGSQYNLKPVAGEVYDQGMGTSYYAVAVVRKNSSYTINNLKGAKS---CHTGFQRTAGWNVPI 142

  Fly   162 HTLQREGGMEVVDCNNQVKTAASYFNNSCAVYSLSDKHNPIGDNSDKLCTLCTGKIPGGR-CSSA 225
            ..|...|.:.||.||.| |..:|:|:.||..          |.....||.||.|...|.. |...
 Frog   143 GYLIDSGRIAVVACNIQ-KAVSSFFSQSCVP----------GSTQADLCQLCIGDANGTNVCDLN 196

  Fly   226 DPYFGYEGAFKCLLE-KGDVAFLRHSTVNEMLQTTEFKN-------IAPDTFELLCRDGRRASIN 282
            ..|..|.|||:||:| :|||||::||||.|   .::.||       :....::||||||..|.|:
 Frog   197 GRYSDYSGAFRCLVEGQGDVAFIKHSTVAE---NSDGKNTDSWAREVISSDYQLLCRDGSHADIS 258

  Fly   283 DYRQCNWGQVPADAIVTSSARSFSDRKQYQQFLKRIAELYSDGTRDDQSRQGGQSFNSRNNINDQ 347
            ::||||..:|||.|::|.:                    .:||:...:..|.||   .:.||:..
 Frog   259 EWRQCNLARVPAHAVMTRT--------------------NTDGSLIYKMLQDGQ---QKYNIHSS 300

  Fly   348 NAYGQFDNNDPYRTQNQYDQYRSERLDSSFAEERNQQDGTNTSILYEKFRIFESKRYGKPNLLFQ 412
            .                                               ||:|:|..|...||||:
 Frog   301 G-----------------------------------------------FRMFDSSAYNSNNLLFR 318

  Fly   413 DSSRALTVIPEDDQSFTKYLG-PAINFIYGIRECP--VP-AMTLCVTSENELDKCIKMRTALKAH 473
            |.:..|..  ..:|::..:|| ..:..:.||...|  :| ::..|..|..|:.||..|....|..
 Frog   319 DMTTELRA--TGNQTYQAWLGDDYLQAMKGINCDPDKLPKSLRWCTLSTPEIWKCADMARVFKDK 381

  Fly   474 LLKPELICKKMHSHINCMQFIEAGKADISVFDAGDVYTGGLNYDLVPFMSEVY---NLGEPEYYV 535
            .|.|.|.|....|...||:.|...:.|....|.||||..|..|.|||...|.|   ||.. .||.
 Frog   382 NLDPSLQCVSADSPEACMELIRQKEVDAVTLDGGDVYKAGKTYGLVPAAGESYPETNLSS-SYYA 445

  Fly   536 VAVAKEDDPDTELTY--LKGKNTCHTGINTAAGWTYPMALFISNGWIRPYGCDSVRAAAEYFTKS 598
            ||:.:. ||....|.  ||||.:||||....|||..|:...|..|.|||..|::.:|.|.:|:.|
 Frog   446 VALVRR-DPLNAFTIHDLKGKKSCHTGYERTAGWNVPIGALIKLGSIRPDECNTAKAVANFFSGS 509

  Fly   599 CVPGAISNEYNTGVPYDSMCDLCHGTS--YRYCRRDASEEYYGHTGAFRCLVEGGGHVAFMKHTT 661
            |||||  |:.|  .| ..:|.||.|.|  ...|.:|..|:|:|::||||||.|..|.|||:||.|
 Frog   510 CVPGA--NQKN--FP-PELCKLCKGDSKGQNKCEKDTREQYFGYSGAFRCLAEKAGDVAFVKHAT 569

  Fly   662 VMESTGGKRKEWWARNALNDDFELLCTDGTRAEIQDYKRCNLGKVKANAVVTRGGVNYNETQMNA 726
            |.|.|.|:..|.||:|..:.||:|||.:|.|||:..|..||..:|.|:||:.     :.:|.::|
 Frog   570 VFELTDGQSTESWAKNLKSSDFQLLCPNGARAEVSQYPDCNWAQVPAHAVMV-----HPDTNIHA 629

  Fly   727 YINLLTYAQQLYGRKEVDAFSFSMF-SSPIGHYDLIFQDATRQLQVIP-PNKRRYDAYLGSDFMR 789
            ...||..||:.||..  ::..|.|| ||.....||||:|:|  .:::| ..|:.|..:|||.::.
 Frog   630 VYGLLANAQEYYGND--NSSQFKMFDSSSYNANDLIFKDST--YKIVPVQEKKTYSQWLGSGYLE 690

  Fly   790 ARRITDCYAGASQLALSVGLLLVGSLV 816
            :.....|.:.|::|.:::..||:.:|:
 Frog   691 SLEGMQCSSSAAKLRVNITFLLISALL 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf2NP_524044.1 PBP2_transferrin 32..372 CDD:270247 103/348 (30%)
PBP2_transferrin 450..792 CDD:270247 140/350 (40%)
TR_FER 452..790 CDD:214514 140/346 (40%)
meltfXP_002937877.2 TR_FER 21..348 CDD:214514 118/420 (28%)
TR_FER 359..695 CDD:214514 140/351 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2434
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4335
Inparanoid 1 1.050 322 1.000 Inparanoid score I2468
OMA 1 1.010 - - QHG45906
OrthoDB 1 1.010 - - D125278at33208
OrthoFinder 1 1.000 - - FOG0007989
OrthoInspector 1 1.000 - - otm48076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1208
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.980

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