DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf2 and zgc:172271

DIOPT Version :9

Sequence 1:NP_524044.1 Gene:Tsf2 / 39435 FlyBaseID:FBgn0036299 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001107938.1 Gene:zgc:172271 / 100000381 ZFINID:ZDB-GENE-080204-110 Length:733 Species:Danio rerio


Alignment Length:844 Identity:226/844 - (26%)
Similarity:357/844 - (42%) Gaps:187/844 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VFVALVGALCFTLANAQHHYDEHKTTRMVWCTKSQAEQYKCQNLT---VAIERDRALFDEVFLNL 67
            |.|.|:..||...:..:         :|.||..|:|||.||..|.   ||:....|:  ..|..|
Zfish     7 VIVVLLLLLCSITSWGK---------KMRWCAVSEAEQKKCAELAKALVAVLPPAAV--TAFARL 60

  Fly    68 TCFMAYSADECIHHIDREKAHITTLDAGDVFTAGRYNSLIPIMQEKLEGGFADYQSVAVIKKGSL 132
            :|..|||..:||:.|...||.:.|||||:|::|.:...|..:.:|....| ....:|||::..|.
Zfish    61 SCVKAYSTADCINKIRDNKADLVTLDAGEVYSAVKQFGLTVVAKEIYRDG-GCILAVAVVRNSSS 124

  Fly   133 PDLNNLRDMRNKRVCFPWVGSLAGWIVPI-HTLQRE----GGMEVVDCNNQVKTAASYFNNSCAV 192
            .|   :|.::..|.|.......|||.:|: |.|.|.    ...|.:.     :..:::||.||..
Zfish   125 LD---MRSLQGSRSCHSGARWTAGWSLPLGHLLSRNLLPWAEDEPIS-----QAVSAFFNASCVP 181

  Fly   193 YSLSDKHNPIGDNSDKLCTLCTG-----KIPGGRC--SSADPYFGYEGAFKCLLE-KGDVAFLRH 249
            .:.:...|        ||:||.|     :.....|  |.::|::..:||.:||.. .||:||:.|
Zfish   182 GATTMAAN--------LCSLCKGQRSYIRQKNFHCETSHSEPFYHNQGALRCLQSGAGDIAFVDH 238

  Fly   250 STVNEMLQTTEFKNIAPDTFELLCRDGRRASINDYRQCNWGQVPADAIVTSSARSFSDRKQYQQF 314
            :.::.:.:..:      |...|||.||..|.::.:|.||.|:.|...:||    ..:.||..::|
Zfish   239 TALDGIDEREK------DELRLLCTDGSLAPLSSFRTCNLGRGPGGGVVT----RMNIRKIARKF 293

  Fly   315 LKRIAELYSDGTRDDQSRQGGQSFNSRNNINDQNAYGQFDNNDPYRTQNQYDQYRSERLDSSFAE 379
            |  :|...|.|.|..:.|                                               
Zfish   294 L--VAAQMSFGWRGRERR----------------------------------------------- 309

  Fly   380 ERNQQDGTNTSILYEKFRIFESKRYGKPNLLFQDSSRALTVIPEDDQSFTKYLGPAINFIYGIRE 444
                           :|::|||..:|..:|||:|.:..|:|:.| |...::.||  ::::..::.
Zfish   310 ---------------RFQLFESASFGGSDLLFRDVTEKLSVLME-DMDMSQVLG--LDYVALLKG 356

  Fly   445 CPVPAMTL-------CVTSENELDKCIKMRTALKAHLLKPELICKKMHSHINCMQFIEAGKADIS 502
            ......:|       |..|..|..||.:...::|:    ..|:|.|..|..:|::.|:..:.|..
Zfish   357 LGHEGSSLEDSVVRWCCISHAEQKKCEQWAISIKS----DPLVCVKASSMSDCIEKIKRDEVDAV 417

  Fly   503 VFDAGDVYTGGLNYDLVPFMSEVYNLGE-----------------PEYYVVAVAKEDDPDTELTY 550
            ..||...:..| ...|||.::|.|  ||                 |..|.|||.:..........
Zfish   418 SLDATHAFIAG-KCGLVPVVTEYY--GEKCETSAGAGGHFESNELPPVYGVAVVRRSSKSLFFGS 479

  Fly   551 LKGKNTCHTGINTAAGWTYPMALFISNGWIRPYGCDSVRAAAEYFTKSCVPGAISNEYNTGVPYD 615
            |..:.:||:.:.:.|||..|:...:|........|:..:..:|.|.|.|:||...|         
Zfish   480 LADRRSCHSHMYSPAGWVLPVRHTLSTEHNNSAPCEPNKVYSEVFWKGCLPGGQGN--------- 535

  Fly   616 SMCDLCHG----TSYRYCRRDASEEYYGHTGAFRCLV-----EGGGHVAFMKHTTVMESTGGKRK 671
             :|.:|.|    .:.:.|..:.:|.|||:.||.||||     :..|.||||:|..:..:......
Zfish   536 -LCKVCMGGTEEAATKRCADNHNERYYGNMGALRCLVGDPTGKSFGDVAFMEHHNLESNIERLNT 599

  Fly   672 EWWARNALNDDFELLCTDGTRAEIQDYKRCNLGKVKANAVVTRGGVNYNETQMNAYI-NLLTYAQ 735
            ..||...:..||||||:||:||.:..:|.||||.|..|.|:||       ..:.|.| :||..:|
Zfish   600 SGWAEGWVTWDFELLCSDGSRAPLSQWKSCNLGAVPPNIVMTR-------PVLTARIYDLLMKSQ 657

  Fly   736 QLYGRKEVDAFS-FSMF-SSPIGHYDLIFQDATRQLQVIPPNKRRYDAYLGSDF-MRARRITDC 796
            .   ..|....| |.:| |...|..||:|:|.|:.|  :..:...|...||::| .:|..|.:|
Zfish   658 D---TTEARPHSGFHLFESQQYGESDLLFKDVTKCL--VHTSHMDYRTILGNEFCSQAESIFNC 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf2NP_524044.1 PBP2_transferrin 32..372 CDD:270247 95/355 (27%)
PBP2_transferrin 450..792 CDD:270247 109/378 (29%)
TR_FER 452..790 CDD:214514 108/374 (29%)
zgc:172271NP_001107938.1 PBP2_transferrin 25..357 CDD:270247 110/427 (26%)
TR_FER 26..357 CDD:214514 109/426 (26%)
TR_FER 369..713 CDD:214514 108/372 (29%)
PBP2_transferrin 369..713 CDD:270247 108/372 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125278at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26146
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.880

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