DRSC/TRiP Functional Genomics Resources

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Protein Alignment nst and cpsG

DIOPT Version :10

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_416552.1 Gene:cpsG / 946574 ECOCYCID:EG10162 Length:456 Species:Escherichia coli


Alignment Length:557 Identity:119/557 - (21%)
Similarity:181/557 - (32%) Gaps:205/557 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AFAREMYPKT---------SKETIQYGTA-------------GFRGKAEFLDSVMFRMGVLATLR 52
            |:...:.|||         :.||::...|             |..|..|...:. |.:||..   
E. coli    31 AYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFAT-FHLGVDG--- 91

  Fly    53 SRYRGGSVIGVMITASHNPEPDNGVKLVDPKGEMLEASWEAIATDLVNVSDQELEQQVAKIIKDN 117
                     |:.:||||||...||:|||......:...     |.|.:|      |::|:.....
E. coli    92 ---------GIEVTASHNPMDYNGMKLVREGARPISGD-----TGLRDV------QRLAEANDFP 136

  Fly   118 NIDVTTSSQVFVGMDNRYHSPRLLKAVAD---GVIALKGNVKEYGIVTTPMLHYFVVAANTKEAY 179
            .:|.|..        .||....|..|..|   |.|    |||.    .||:.   :|..:...|.
E. coli   137 PVDETKR--------GRYQQINLRDAYVDHLFGYI----NVKN----LTPLK---LVINSGNGAA 182

  Fly   180 GKPTE--EGYYDKLIKAFELLRNGRLENGNYRNSIIYDGANGVGARKMLQFIKRMKGTLNVTVIN 242
            |...:  |..:..|....||::.....:||:.|.|    .|        ..:...:......||.
E. coli   183 GPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGI----PN--------PLLPECRDDTRNAVIK 235

  Fly   243 QGIGVGKINEDCGADYVKVQQSPPKSMPEDVKPYTRCVSVDGDADRVVYFFTDDKGEFHLLDGDR 307
            .|..:|                               ::.|||.||.  |..|:||:|       
E. coli   236 HGADMG-------------------------------IAFDGDFDRC--FLFDEKGQF------- 260

  Fly   308 IATLIAGYLMELVTQSEISLRLGLVQTAYANGASTDYIVDQLKFPVSCVPTGVKHLHHKALEYDI 372
                |.||.:           :||:..|:..           |.|      |.|.:|...|.::.
E. coli   261 ----IEGYYI-----------VGLLAEAFLE-----------KNP------GAKIIHDPRLSWNT 293

  Fly   373 GVYFEANGHGTIVFSDNAKATIAQVAQTKESA-----------------------KTLLL--LID 412
            .....|.| ||.|.|....|.|.: ...||.|                       ..||:  |:.
E. coli   294 VDVVTAAG-GTPVMSKTGHAFIKE-RMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVC 356

  Fly   413 LINETVGDAISDMLLVETILNHKGWDVQDWISSYNDLPNRQLKVKVQDRNVIET-TDAERVCV-K 475
            |.::|:|:.:.|.:..              ..:..:: |.:|...|:..|.:|. ...|.:.| :
E. coli   357 LKDKTLGELVRDRMAA--------------FPASGEI-NSKLAQPVEAINRVEQHFSREALAVDR 406

  Fly   476 PEGLQTEINQVVAKYKRGRSFVRPSGTEDVVRVYAEA 512
            .:|    |:...|.:   |..:|.|.||.|||:..|:
E. coli   407 TDG----ISMTFADW---RFNLRTSNTEPVVRLNVES 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PGM3 25..529 CDD:100088 113/533 (21%)
cpsGNP_416552.1 PRK15414 1..456 CDD:185312 119/557 (21%)

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