DRSC/TRiP Functional Genomics Resources

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Protein Alignment nst and PCM1

DIOPT Version :9

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_010856.1 Gene:PCM1 / 856652 SGDID:S000000784 Length:557 Species:Saccharomyces cerevisiae


Alignment Length:531 Identity:242/531 - (45%)
Similarity:319/531 - (60%) Gaps:32/531 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KTSKETIQYGTAGFRGKAEFLDSVMFRMGVLATLRSRYRGGSVIGVMITASHNPEPDNGVKLVDP 82
            :|......|||||||..|:.||:|||..|:||.|||....|..:||||||||||..|||||:|:|
Yeast    17 RTKNVQFSYGTAGFRTLAKNLDTVMFSTGILAVLRSLKLQGQYVGVMITASHNPYQDNGVKIVEP 81

  Fly    83 KGEMLEASWEAIATDLVNVSD-----QELEQQVAKIIKDNNIDVTTS--SQVFVGMDNRYHSPRL 140
            .|.||.|:||..|..|.|.:.     :|...::||:|:...||:.|:  ..:.||.|:|..||.|
Yeast    82 DGSMLLATWEPYAMQLANAASFATNFEEFRVELAKLIEHEKIDLNTTVVPHIVVGRDSRESSPYL 146

  Fly   141 LKAVADGVIAL-KGNVKEYGIVTTPMLHYFVVAANTKEAYGK----PTEEGYYDKLIKAF-ELLR 199
            |:.:...:.:: ...|.:.|.||||.|||....:|.::..|.    .||:.||...|.|| ||..
Yeast   147 LRCLTSSMASVFHAQVLDLGCVTTPQLHYITDLSNRRKLEGDTAPVATEQDYYSFFIGAFNELFA 211

  Fly   200 NGRLENGNYRNSIIYDGANGVGARKMLQFIKRMKGTL---NVTVINQGIGVGK-INEDCGADYVK 260
            ..:||.......:..|.|||:|..::.:.:......:   .|.|||....|.: :|.:|||||||
Yeast   212 TYQLEKRLSVPKLFIDTANGIGGPQLKKLLASEDWDVPAEQVEVINDRSDVPELLNFECGADYVK 276

  Fly   261 VQQSPPKSMPEDVKPYTRCVSVDGDADRVVYFFTDDKGEFHLLDGDRIATLIAGYL---MELVTQ 322
            ..|..||.:.........| |.||||||||:::.|...:|||||||:|:||.|.:|   :|| ..
Yeast   277 TNQRLPKGLSPSSFDSLYC-SFDGDADRVVFYYVDSGSKFHLLDGDKISTLFAKFLSKQLEL-AH 339

  Fly   323 SEISLRLGLVQTAYANGASTDYIVDQLKFPVSCVPTGVKHLHHK-ALEYDIGVYFEANGHGTIVF 386
            .|.||::|:||||||||:||.||.:.|..||||..||||||||: |.:||||:||||||||||:|
Yeast   340 LEHSLKIGVVQTAYANGSSTAYIKNTLHCPVSCTKTGVKHLHHEAATQYDIGIYFEANGHGTIIF 404

  Fly   387 SDNAKATI-AQVAQTKESAKTLLL-----LIDLINETVGDAISDMLLVETILNHKGWDVQDWISS 445
            |:....|| ::::::|.:..||.|     ..:|||:||||||||||.|...|........||...
Yeast   405 SEKFHRTIKSELSKSKLNGDTLALRTLKCFSELINQTVGDAISDMLAVLATLAILKMSPMDWDEE 469

  Fly   446 YNDLPNRQLKVKVQDRNVIETTDAERVCVKPEGLQTEINQVVAKYKRGRSFVRPSGTEDVVRVYA 510
            |.||||:.:|..|.||::.:|||.||..:.|.|||.:|:.|||||..||||||.|||||.|||||
Yeast   470 YTDLPNKLVKCIVPDRSIFQTTDQERKLLNPVGLQDKIDLVVAKYPMGRSFVRASGTEDAVRVYA 534

  Fly   511 EAATKEDTDNL 521
            |.   :|:..|
Yeast   535 EC---KDSSKL 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PLN02895 6..539 CDD:215485 242/531 (46%)
PGM3 25..529 CDD:100088 241/524 (46%)
PCM1NP_010856.1 PGM3 24..553 CDD:100088 241/524 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341316
Domainoid 1 1.000 211 1.000 Domainoid score I503
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9205
Inparanoid 1 1.050 396 1.000 Inparanoid score I319
Isobase 1 0.950 - 0 Normalized mean entropy S876
OMA 1 1.010 - - QHG56540
OrthoFinder 1 1.000 - - FOG0003921
OrthoInspector 1 1.000 - - oto100379
orthoMCL 1 0.900 - - OOG6_102413
Panther 1 1.100 - - LDO PTHR45955
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2021
SonicParanoid 1 1.000 - - X2227
TreeFam 1 0.960 - -
1615.740

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