DRSC/TRiP Functional Genomics Resources

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Protein Alignment nst and Pgm2l1

DIOPT Version :9

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001102924.1 Gene:Pgm2l1 / 685076 RGDID:1583226 Length:621 Species:Rattus norvegicus


Alignment Length:665 Identity:120/665 - (18%)
Similarity:205/665 - (30%) Gaps:278/665 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 INLRTVYAFAREMYPKTSKETIQYGTAGF------RGK----------AEFLDSVMFRMGVLATL 51
            ||..||....:.||....:....:...||      ||:          |:...:|:....|...|
  Rat    83 INDLTVIQSTQGMYKYLERCFSDFKQRGFVVGYDTRGQVTSSCSSQRLAKLTAAVLLAKDVPVYL 147

  Fly    52 RSRY-----------RGGSVIGVMITASHNPEPDNGVKLVDPKGEMLEASWEAIATDLVNVSDQE 105
            .|||           ...:|.|||||||||.:.|||.|:.          ||             
  Rat   148 FSRYVPTPFVPYAVQELKAVAGVMITASHNRKEDNGYKVY----------WE------------- 189

  Fly   106 LEQQVAKIIKDNNIDVTTSSQVFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPMLHYFV 170
                             |.:|:     ...|...:||.:.:.|                      
  Rat   190 -----------------TGAQI-----TSPHDKEILKCIEECV---------------------- 210

  Fly   171 VAANTKEAYGKPTEEGYYDKLIKAFELLRNGRLENGNYRNSIIYDGANGVGARKMLQFIKRM--- 232
                      :|.::.:.|.|:....|.:               |....: .|:.::.:|::   
  Rat   211 ----------EPWDDSWNDNLVDTSPLKK---------------DPLQDI-CRRYMEDLKKICFY 249

  Fly   233 -----KGTLN-VTVINQGIGVGKINEDCGADYVKVQ-----QSPPKSMPEDVKP-----YTRC-- 279
                 |.||. |.....|:         |.|||::.     ..||..:||...|     ..:|  
  Rat   250 RDLNSKTTLKFVHTSFHGV---------GHDYVQLAFQVFGFKPPIPVPEQKDPDPDFSTVKCPN 305

  Fly   280 -----------------------VSVDGDADRVVYFFTDDKGEFHLLDGDRIATLIAGYLMELVT 321
                                   ::.|.||||:......:.|.:.:..|:.:|.|...::.:...
  Rat   306 PEEGESVLELSLRLAEKENARIVLATDPDADRLAVAELQENGHWKVFTGNELAALFGWWMFDCWK 370

  Fly   322 QSEISLRLGLVQTAYANGASTDYIVDQLKFPVSCVPTGVKHLHHKALEYDIGVYFEAN------- 379
            :|:.:..   |:..|                  .:.|.|.....||:....|.:||..       
  Rat   371 KSKPNAD---VKNVY------------------MLATTVSSKILKAIALKEGFHFEETLPGFKWI 414

  Fly   380 --------GHG-----------------TIVFSD--NAKATIAQVAQTKESAK-TLLLLIDLINE 416
                    |||                 :::..|  :|...:|::|...::.| ||:..:..:.|
  Rat   415 GSRIKDLLGHGKEVLFAFEESIGFLCGTSVLDKDGVSAAVVVAEMAAFLDARKVTLMEQLMKVYE 479

  Fly   417 TVGDAIS--------DMLLVETILNH-KGWD----------------VQDWISSY-NDLPNRQLK 455
            |.|..:|        |...::||... :.::                |:|..:.| :..||::..
  Rat   480 TYGYHMSKTSYFLCYDPPTIKTIFERIRNFESPKEYPKFCGAFAILHVRDITTGYDSSQPNKKSV 544

  Fly   456 VKVQDRNVIETTDAERVCVKPEGLQTEINQVVAKYKRGRSFVRPSGTEDVVRVYAEAAT---KED 517
            :.|...:.:.|...:..||                    :.:|.||||..::.|||...   :.|
  Rat   545 LPVSKNSQMITFTFQNGCV--------------------ATLRTSGTEPKIKYYAEMCASPGQSD 589

  Fly   518 TDNLAYEVGLLVQKL 532
            |..|..|:..|:..|
  Rat   590 TALLEEELKKLIDAL 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PLN02895 6..539 CDD:215485 118/662 (18%)
PGM3 25..529 CDD:100088 112/638 (18%)
Pgm2l1NP_001102924.1 PTZ00150 24..620 CDD:240294 120/665 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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