DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nst and pgm3

DIOPT Version :10

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001007054.1 Gene:pgm3 / 474321 ZFINID:ZDB-GENE-041024-13 Length:545 Species:Danio rerio


Alignment Length:531 Identity:289/531 - (54%)
Similarity:365/531 - (68%) Gaps:11/531 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EMYPKTSKETIQYGTAGFRGKAEFLDSVMFRMGVLATLRSRYRGGSVIGVMITASHNPEPDNGVK 78
            :::||....|:||||||||..|:.||.:|||||:||||||: :..|.||||:|||||||.|||||
Zfish    12 KLHPKPEGLTLQYGTAGFRTNAKHLDHIMFRMGLLATLRSK-KTKSTIGVMVTASHNPEEDNGVK 75

  Fly    79 LVDPKGEMLEASWEAIATDLVNVSDQELEQQVAKIIKDNNIDVTTSSQVFVGMDNRYHSPRLLKA 143
            |:||.|||:.|:||..||.|.|.....|...:..||:..:|.::.::.|::|.|.|..|..|.:|
Zfish    76 LIDPMGEMVAATWEEYATQLANAEQDHLLAALKDIIEKEDISMSEAASVYIGRDTRPSSAALSQA 140

  Fly   144 VADGVIALKGNVKEYGIVTTPMLHYFVVAANTKEAYGKPTEEGYYDKLIKAFELLRNGRLENGNY 208
            |.|||.:|.|...:||:|:||.|||.|...|||..||..|.||||.||.:||..|.:......:.
Zfish   141 VLDGVSSLGGKTHDYGLVSTPQLHYMVCCCNTKGRYGSATLEGYYQKLSQAFLQLTHNVPNRTDD 205

  Fly   209 RNSIIYDGANGVGARKMLQFIKRMKGTLNVTVINQGIGVGKINEDCGADYVKVQQSPPKSMPEDV 273
            :..::.|||||:||.||.:....::..|.|.:.|.| ..||:|..||||||||||..|:.:...|
Zfish   206 QKRLLLDGANGIGALKMKELEPFIRSELQVVLSNDG-SSGKLNHLCGADYVKVQQKAPQGVSMGV 269

  Fly   274 KPYTRCVSVDGDADRVVYFFTDDKGEFHLLDGDRIATLIAGYLMELVTQSEISLRLGLVQTAYAN 338
            .  .||.|.||||||:||::||.|..|||||||:|||||:.:|.||:||:.::|::.:|||||||
Zfish   270 G--ERCCSFDGDADRIVYYYTDSKNCFHLLDGDKIATLISTFLKELLTQAGLNLQVAVVQTAYAN 332

  Fly   339 GASTDYIVDQLKFPVSCVPTGVKHLHHKALEYDIGVYFEANGHGTIVFSDNAKATIAQVA----- 398
            |:||.|:.|.:|..|.|..||||||||.|.|||||||||||||||::||..|:..|.::.     
Zfish   333 GSSTRYLEDVMKVAVCCTKTGVKHLHHAAQEYDIGVYFEANGHGTVLFSKAAQKQIVELVKDSNV 397

  Fly   399 --QTKESAKTLLLLIDLINETVGDAISDMLLVETILNHKGWDVQDWISSYNDLPNRQLKVKVQDR 461
              :.|.:||.|...::|||:||||||||||::|.:|..:|..||||...|.|||||||||.|.||
Zfish   398 NDERKHAAKLLENTVNLINQTVGDAISDMLVIEAVLAIRGMSVQDWDEIYTDLPNRQLKVTVSDR 462

  Fly   462 NVIETTDAERVCVKPEGLQTEINQVVAKYKRGRSFVRPSGTEDVVRVYAEAATKEDTDNLAYEVG 526
            .||.||||||..|.|||||..|:.:|.|||..|||||||||||||||||||.|:|..|.||:||.
Zfish   463 RVINTTDAERRAVTPEGLQDAIDSLVKKYKNARSFVRPSGTEDVVRVYAEADTQEGADRLAHEVS 527

  Fly   527 LLVQKLAGGVG 537
            |.|.:||||||
Zfish   528 LAVHRLAGGVG 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PGM3 25..529 CDD:100088 279/510 (55%)
pgm3NP_001007054.1 PGM3 23..530 CDD:100088 279/510 (55%)

Return to query results.
Submit another query.