DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nst and pgm2l1

DIOPT Version :9

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001091955.1 Gene:pgm2l1 / 449945 ZFINID:ZDB-GENE-041008-205 Length:619 Species:Danio rerio


Alignment Length:652 Identity:124/652 - (19%)
Similarity:211/652 - (32%) Gaps:244/652 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VYAFAREMYP--KTSKETIQYGT-----AGFRGK--AEFLDSVMFRMGVLATLRSRY-------- 55
            :|.:..:.:|  ||....:.|.|     :|...:  |:...:||....|...|.|.|        
Zfish    92 LYKYLAKCFPDLKTRGLVVGYDTRAQASSGCTSERLAKLTAAVMLCKDVPVYLFSTYVPTPFVPY 156

  Fly    56 ---RGGSVIGVMITASHNPEPDNGVKLVDPKGEMLEASWEAIATDLVNVSDQELEQQVAKIIKDN 117
               :.|:..|||||||||.:.|||.|:.          |.                        |
Zfish   157 AVMKYGAAAGVMITASHNRKEDNGYKVY----------WH------------------------N 187

  Fly   118 NIDVTTSSQVFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPMLHYFVVAANTKEAYGKP 182
            ...:.:.           |...:|..:                                |...:|
Zfish   188 GAQIASP-----------HDKEILHCI--------------------------------EESAEP 209

  Fly   183 TEEGYYDKLIKAFELLRNGRLENGNY-----RNSIIYDGANGVGARKMLQFIKRMKGTLNVTVIN 242
            ..|.:.:.|::. .||:...||:..:     .|::.:.  ..:.|:..|:|:.           :
Zfish   210 WAESWNEDLVEN-SLLKRDPLEDVCHWYMEELNTLCFH--RELNAKSPLKFVH-----------S 260

  Fly   243 QGIGVGKINEDCGADYVK--VQQ---SPPKSMPEDVKP-----YTRC------------------ 279
            ...|||.       :||:  .||   .||..:||...|     ...|                  
Zfish   261 SFHGVGH-------NYVQRAFQQFGFPPPIPVPEQKDPDPDFSTVSCPNPEEGESVLELSLRLAE 318

  Fly   280 -------VSVDGDADRVVYFFTDDKGEFHLLDGDRIATLIAGYLMELVTQSEISLRLGLVQTAYA 337
                   |:.|.||||:.....:|...:.:..|:.:|.|:..::  |....|          |:.
Zfish   319 REKARIVVATDPDADRLAVAEQNDNCGWKVFTGNELAALLGWWM--LFNWKE----------AHP 371

  Fly   338 NGASTDYI-----------------VDQLKFPVSCVPTGVK------HLHHKALEYDIGVYFEAN 379
            :.|.|:.:                 ::...|. ..:| |.|      |...||.:..|..:.|:.
Zfish   372 DPADTERVYMLATTVSSKILEAFARIEGFHFE-ETLP-GFKWIGNRIHELKKAGKEVIFSFEESI 434

  Fly   380 GH--GTIVFSDNAKATIAQVAQTKE--SAKTLLLLIDLIN--ETVGDAISDMLLV---------- 428
            |.  |.:|...:..:|.|.||:...  ..|.|.|...|.|  |..|..||....|          
Zfish   435 GFLCGNMVLDKDGVSTAAVVAEMASYLHTKNLSLNQQLCNIYEIYGYHISRTSYVLCNDPPTIHR 499

  Fly   429 --ETILNHKGWDVQDWISSYNDLPNRQLKVKVQDRNV---IETTDAERVCVKPEGLQTEI----- 483
              ..:.|..|..|  :.:|..|.....:      |:|   .:::..::.||.|....:::     
Zfish   500 IFSRLRNFGGQGV--YPTSCGDYCITHI------RDVTTGYDSSQPDKKCVLPLSKSSQMLTFTF 556

  Fly   484 -NQVVAKYKRGRSFVRPSGTEDVVRVYAE---AATKEDTDNLAYEVGLLVQKLAGGVGPPLTKPN 544
             |.:||.       :|.||||..::.|.|   :..:.|..:|..|    ::|:|..:.....:|:
Zfish   557 QNGIVAT-------LRTSGTEPKIKYYTEFCASPGERDISSLDEE----LRKVAAALVEEFLEPD 610

  Fly   545 SS 546
            .:
Zfish   611 KN 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PLN02895 6..539 CDD:215485 123/643 (19%)
PGM3 25..529 CDD:100088 117/614 (19%)
pgm2l1NP_001091955.1 PTZ00150 22..618 CDD:240294 124/652 (19%)
PGM2 61..600 CDD:100092 122/638 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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