DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nst and pgm2

DIOPT Version :9

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_998051.1 Gene:pgm2 / 405822 ZFINID:ZDB-GENE-040426-2218 Length:611 Species:Danio rerio


Alignment Length:557 Identity:108/557 - (19%)
Similarity:187/557 - (33%) Gaps:197/557 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GSVIGVMITASHNPEPDNGVK--------LVDPKGEMLEA-----------SW---EAIATDLVN 100
            |...|:|:||||||:.|||.|        ::.|..:.:.|           ||   |.:.:.|:|
Zfish   153 GLCAGIMVTASHNPKQDNGYKVYWANGAQIIPPHDKGIAAAIEQNLEPWPESWDTDEGLRSSLLN 217

  Fly   101 VSDQELEQQVAKIIKDNNIDVTTSSQVFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPM 165
            ...|::.::..:.|:.:         .|....||..:.:::.....||          |      
Zfish   218 DPYQDIHREYCQTIQQH---------CFHRELNRNTAVKIVHTSVHGV----------G------ 257

  Fly   166 LHYFVVAANTKEAYGKPTEEGYYDKLIKAFELLRNGRLENG----------NYRNSIIYDGANGV 220
             |.||.||                  .|||:|.....:|..          .|.|.   :...||
Zfish   258 -HIFVQAA------------------FKAFDLQPPYAVEEQKDPDPEFPTVKYPNP---EEGEGV 300

  Fly   221 GARKMLQFIKRMKGTLNVTVINQGIGVGKINEDCGADYVKVQQSPPKSMPEDVKPYTRCVSVDGD 285
               ..|.|....|...:|.:.|                                        |.|
Zfish   301 ---LTLSFALADKEGASVILAN----------------------------------------DPD 322

  Fly   286 ADRVVYFFTDDKGEFHLLDGDRIATLIAGYLMELVTQSEISLRLGLVQTAYANGASTD-----YI 345
            |||:......:.|::.:..|:.:..|:..::.:...|.::..: |.::..|...::..     .|
Zfish   323 ADRLAIAEKQESGKWRVFSGNELGALLGWWIFQCWKQQKVEGK-GSIKDVYMLSSTVSSKILRAI 386

  Fly   346 VDQLKFPVSCVPTGVKHLHHKALE-YDIG-----VYFEANGH---GTIVFSDN-AKATIAQVAQT 400
            ..:..|......||.|.:.::|.| .|.|     .:.||.|:   ..::..|. :.|.||....:
Zfish   387 AVKEGFHFEETLTGFKWMGNRARELMDQGKTVLFAFEEAIGYMCSPAVLDKDGVSAAAIAGEFIS 451

  Fly   401 KESAKTLLLLIDL--INETVG--------------DAISDMLLVETILNHKGWD----------- 438
            ..::|.:.|...|  |.|..|              |.|..  |.|.:.|: |.|           
Zfish   452 YLASKNITLSHQLRSIYEEYGYHITKNSYFICHNQDTIKK--LFERLRNY-GVDNSYPKECGGFA 513

  Fly   439 ---VQDWISSY-NDLPNRQLKVKVQDRNVIETTDAERVCVKPEGLQTEINQVVAKYKRGR-SFVR 498
               |:|..:.| ::.||        ::.|:.|:.:.::             :...:..|. :.:|
Zfish   514 ISAVRDLTTGYDSNQPN--------NKAVLPTSKSSQM-------------ITFSFANGGVATMR 557

  Fly   499 PSGTEDVVRVYAE---AATKEDTDNLAYEVGLLVQKL 532
            .||||..::.|.|   |....|.:.|..|:..||..:
Zfish   558 TSGTEPKIKYYTELCAAPGNSDLNQLTKELDNLVDAI 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PLN02895 6..539 CDD:215485 108/557 (19%)
PGM3 25..529 CDD:100088 106/552 (19%)
pgm2NP_998051.1 PTZ00150 10..611 CDD:240294 108/557 (19%)
PGM2 52..592 CDD:100092 107/553 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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