DRSC/TRiP Functional Genomics Resources

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Protein Alignment nst and pgm2

DIOPT Version :10

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_998051.1 Gene:pgm2 / 405822 ZFINID:ZDB-GENE-040426-2218 Length:611 Species:Danio rerio


Alignment Length:555 Identity:108/555 - (19%)
Similarity:189/555 - (34%) Gaps:193/555 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GSVIGVMITASHNPEPDNGVK--------LVDPKGEMLEA-----------SW---EAIATDLVN 100
            |...|:|:||||||:.|||.|        ::.|..:.:.|           ||   |.:.:.|:|
Zfish   153 GLCAGIMVTASHNPKQDNGYKVYWANGAQIIPPHDKGIAAAIEQNLEPWPESWDTDEGLRSSLLN 217

  Fly   101 VSDQELEQQVAKIIKDNNIDVTTSSQVFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPM 165
            ...|::.::..:.|:.:         .|....||..:.:::.....||          |      
Zfish   218 DPYQDIHREYCQTIQQH---------CFHRELNRNTAVKIVHTSVHGV----------G------ 257

  Fly   166 LHYFVVAANTKEAYGKPTEEGYYDKLIKAFELLRNGRLENG----------NYRNSIIYDGANGV 220
             |.||.||                  .|||:|.....:|..          .|.|.   :...||
Zfish   258 -HIFVQAA------------------FKAFDLQPPYAVEEQKDPDPEFPTVKYPNP---EEGEGV 300

  Fly   221 GARKMLQFIKRMKGTLNVTVINQGIGVGKINEDCGADYVKVQQSPPKSMPEDVKPYTRCVSVDGD 285
               ..|.|....|...:|.:.|                                        |.|
Zfish   301 ---LTLSFALADKEGASVILAN----------------------------------------DPD 322

  Fly   286 ADRVVYFFTDDKGEFHLLDGDRIATLIAGYLMELVTQSEISLRLGLVQTAYANGASTD-----YI 345
            |||:......:.|::.:..|:.:..|:..::.:...|.::..: |.::..|...::..     .|
Zfish   323 ADRLAIAEKQESGKWRVFSGNELGALLGWWIFQCWKQQKVEGK-GSIKDVYMLSSTVSSKILRAI 386

  Fly   346 VDQLKFPVSCVPTGVKHLHHKALE-YDIG-----VYFEANGH---GTIVFSDN-AKATIAQVAQT 400
            ..:..|......||.|.:.::|.| .|.|     .:.||.|:   ..::..|. :.|.||....:
Zfish   387 AVKEGFHFEETLTGFKWMGNRARELMDQGKTVLFAFEEAIGYMCSPAVLDKDGVSAAAIAGEFIS 451

  Fly   401 KESAKTLLLLIDL--INETVGDAIS----------DML--LVETILNHKGWD------------- 438
            ..::|.:.|...|  |.|..|..|:          |.:  |.|.:.|: |.|             
Zfish   452 YLASKNITLSHQLRSIYEEYGYHITKNSYFICHNQDTIKKLFERLRNY-GVDNSYPKECGGFAIS 515

  Fly   439 -VQDWISSY-NDLPNRQLKVKVQDRNVIETTDAERVCVKPEGLQTEINQVVAKYKRGR-SFVRPS 500
             |:|..:.| ::.||        ::.|:.|:.:.::             :...:..|. :.:|.|
Zfish   516 AVRDLTTGYDSNQPN--------NKAVLPTSKSSQM-------------ITFSFANGGVATMRTS 559

  Fly   501 GTEDVVRVYAE---AATKEDTDNLAYEVGLLVQKL 532
            |||..::.|.|   |....|.:.|..|:..||..:
Zfish   560 GTEPKIKYYTELCAAPGNSDLNQLTKELDNLVDAI 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PGM3 25..529 CDD:100088 106/550 (19%)
pgm2NP_998051.1 PTZ00150 10..611 CDD:240294 108/555 (19%)

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