DRSC/TRiP Functional Genomics Resources

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Protein Alignment nst and Pgm2

DIOPT Version :10

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001099477.2 Gene:Pgm2 / 289632 RGDID:1306061 Length:620 Species:Rattus norvegicus


Alignment Length:544 Identity:99/544 - (18%)
Similarity:179/544 - (32%) Gaps:186/544 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GVMITASHNPEPDNGVKLVDPKGEMLEASWEAIATDLVNVSDQELEQQVAKIIKDNNIDVTTSSQ 126
            |:||||||||:.|||.|:.          |:. ...:::..|:.:.|.:     :.|::      
  Rat   167 GIMITASHNPKQDNGYKVY----------WDN-GAQIISPHDRGISQAI-----EENLE------ 209

  Fly   127 VFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPMLHYFVVAANTKEAYGKPTEEGYYDKL 191
                                                                   |..:.:.:.|
  Rat   210 -------------------------------------------------------PWPQAWDESL 219

  Fly   192 IKAFELLRN--GRLENGNYRNSIIYDGANGVGARKMLQFIKRMKGTLNVTVINQGIGVGKINEDC 254
            |.:..||.|  ..:.|..:.:...|.....|.....::|:.        |.::   |||  :|..
  Rat   220 IDSSSLLHNPSTSISNDYFEDLKKYCFHRTVNRESQVKFVH--------TSVH---GVG--HEFV 271

  Fly   255 GADYVKVQQSPPKSMPEDVKPYTRCVSV------------------------------DGDADRV 289
            .:.:.....:||:::|:...|.....:|                              |.||||:
  Rat   272 QSAFKAFDLNPPEAVPQQKDPDPEFPTVKYPNPEEGKGVLTLSFELADKIKAKIVLANDPDADRL 336

  Fly   290 VYFFTDDKGEFHLLDGDRIATLIAGYLM---ELVTQSEISLRLGLVQTAYANGASTDYIVDQLKF 351
            ......|.||:.:..|:.:..|:..:|.   :...|.:.:|:...:.::..:......|..:..|
  Rat   337 AVAEKQDSGEWRVFSGNELGALLGWWLFTSWKEKNQGQSNLKDTYMLSSTVSSKILRAIALKEGF 401

  Fly   352 PVSCVPTGVKHLHHKALE-YDIG-----VYFEANGHGTIVF---SDNAKATIAQVAQTKESA-KT 406
            ......||.|.:.::|.: .|.|     .:.||.|:....|   .|...|.:.........| |.
  Rat   402 HFEETLTGFKWMGNRAKQLIDQGKTVLFAFEEAIGYMCCPFVLDKDGVSAAVISAELVSFLATKN 466

  Fly   407 LLLLIDL--INETVG------------DAISDMLLVETILNHKGWD-------------VQDWIS 444
            |.|.:.|  |....|            |..:...|.|.:.|:.|.:             |:|..:
  Rat   467 LSLSLQLKAIYLEYGYHITTASYFICHDQGTIQKLFENLRNYDGKNKYPKTCGKFEISAVRDLTT 531

  Fly   445 SY-NDLPNRQLKVKVQDRNVIETTDAERVCVKPEGLQTEINQVVAKYKRGRSFVRPSGTEDVVRV 508
            .| ::.|::        :.|:.|:.:.::..     .|.:|..||.       :|.||||..::.
  Rat   532 GYDSNQPDK--------KAVLPTSKSSQMIT-----FTFVNGGVAT-------MRTSGTEPKIKY 576

  Fly   509 YAEAAT---KEDTDNLAYEVGLLV 529
            |||...   ..|.:.|..|:..||
  Rat   577 YAELCAPPGNSDPEQLKRELDELV 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PGM3 25..529 CDD:100088 97/542 (18%)
Pgm2NP_001099477.2 PTZ00150 19..620 CDD:240294 99/544 (18%)

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