DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nst and Pgm2

DIOPT Version :9

Sequence 1:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001099477.2 Gene:Pgm2 / 289632 RGDID:1306061 Length:620 Species:Rattus norvegicus


Alignment Length:544 Identity:99/544 - (18%)
Similarity:179/544 - (32%) Gaps:186/544 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GVMITASHNPEPDNGVKLVDPKGEMLEASWEAIATDLVNVSDQELEQQVAKIIKDNNIDVTTSSQ 126
            |:||||||||:.|||.|:.          |:. ...:::..|:.:.|.:     :.|::      
  Rat   167 GIMITASHNPKQDNGYKVY----------WDN-GAQIISPHDRGISQAI-----EENLE------ 209

  Fly   127 VFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPMLHYFVVAANTKEAYGKPTEEGYYDKL 191
                                                                   |..:.:.:.|
  Rat   210 -------------------------------------------------------PWPQAWDESL 219

  Fly   192 IKAFELLRN--GRLENGNYRNSIIYDGANGVGARKMLQFIKRMKGTLNVTVINQGIGVGKINEDC 254
            |.:..||.|  ..:.|..:.:...|.....|.....::|:.        |.::   |||  :|..
  Rat   220 IDSSSLLHNPSTSISNDYFEDLKKYCFHRTVNRESQVKFVH--------TSVH---GVG--HEFV 271

  Fly   255 GADYVKVQQSPPKSMPEDVKPYTRCVSV------------------------------DGDADRV 289
            .:.:.....:||:::|:...|.....:|                              |.||||:
  Rat   272 QSAFKAFDLNPPEAVPQQKDPDPEFPTVKYPNPEEGKGVLTLSFELADKIKAKIVLANDPDADRL 336

  Fly   290 VYFFTDDKGEFHLLDGDRIATLIAGYLM---ELVTQSEISLRLGLVQTAYANGASTDYIVDQLKF 351
            ......|.||:.:..|:.:..|:..:|.   :...|.:.:|:...:.::..:......|..:..|
  Rat   337 AVAEKQDSGEWRVFSGNELGALLGWWLFTSWKEKNQGQSNLKDTYMLSSTVSSKILRAIALKEGF 401

  Fly   352 PVSCVPTGVKHLHHKALE-YDIG-----VYFEANGHGTIVF---SDNAKATIAQVAQTKESA-KT 406
            ......||.|.:.::|.: .|.|     .:.||.|:....|   .|...|.:.........| |.
  Rat   402 HFEETLTGFKWMGNRAKQLIDQGKTVLFAFEEAIGYMCCPFVLDKDGVSAAVISAELVSFLATKN 466

  Fly   407 LLLLIDL--INETVG------------DAISDMLLVETILNHKGWD-------------VQDWIS 444
            |.|.:.|  |....|            |..:...|.|.:.|:.|.:             |:|..:
  Rat   467 LSLSLQLKAIYLEYGYHITTASYFICHDQGTIQKLFENLRNYDGKNKYPKTCGKFEISAVRDLTT 531

  Fly   445 SY-NDLPNRQLKVKVQDRNVIETTDAERVCVKPEGLQTEINQVVAKYKRGRSFVRPSGTEDVVRV 508
            .| ::.|::        :.|:.|:.:.::..     .|.:|..||.       :|.||||..::.
  Rat   532 GYDSNQPDK--------KAVLPTSKSSQMIT-----FTFVNGGVAT-------MRTSGTEPKIKY 576

  Fly   509 YAEAAT---KEDTDNLAYEVGLLV 529
            |||...   ..|.:.|..|:..||
  Rat   577 YAELCAPPGNSDPEQLKRELDELV 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nstNP_648588.1 PLN02895 6..539 CDD:215485 99/544 (18%)
PGM3 25..529 CDD:100088 97/542 (18%)
Pgm2NP_001099477.2 PTZ00150 19..620 CDD:240294 99/544 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.