DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcn5 and ep300b

DIOPT Version :9

Sequence 1:NP_648586.2 Gene:Gcn5 / 39431 FlyBaseID:FBgn0020388 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_009297682.1 Gene:ep300b / 565612 ZFINID:ZDB-GENE-080403-15 Length:2646 Species:Danio rerio


Alignment Length:1072 Identity:185/1072 - (17%)
Similarity:320/1072 - (29%) Gaps:379/1072 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGGPSITIKS--QPIDGNNTGNAAAQQQQQ-AANGAATAGASGAAGSA---------------- 46
            |:|..::...|  ||..|.....||.:.||. |.|.....||.|..|.:                
Zfish   190 MAGNGNMLPDSLQQPNAGQQMAQAAMRPQQPGAVNKMGMMGAPGPYGGSYGQCGGQSQLGPQLQN 254

  Fly    47 --------------------------QNPGHGGAASGAGSVPAEGTRQNSLQRIQQRKQKVFNLP 85
                                      |.||..|..||.|...|.       ......|:|:    
Zfish   255 KAGQPNSINQFNMDKKPQLGQNMGGMQGPGVVGGVSGPGGTAAP-------PAADPEKRKL---- 308

  Fly    86 VPQKLAKLSMYSAC----QSEG----CRCTGWKTPQENRHRDVESSYCPEFNEECRNTSCRHSLR 142
            :.|:|..|.....|    |:.|    |.....:|.:...:   ..::| :..:.|:...|..| |
Zfish   309 IQQQLVLLLHAHKCHRREQANGEVRQCNLPHCRTMKNVLN---HMTHC-QAGKSCQVAHCASS-R 368

  Fly   143 SHIAHLDNISSSSMNELLGAIIDMENLFMSMQRVEDEDTKKVYQYLFRLLRQCVLTRQQAVIRGP 207
            ..|:|..|.:....           .:.:.::...|:..           :|.:|......:.||
Zfish   369 QIISHWKNCTRHDC-----------PVCLPLKSAGDKRN-----------QQSLLGGAGMAMGGP 411

  Fly   208 LG-------------DPP--FETPCITKAVLSL-VFYKYNHLSTPELQTMTEVAKTFLNFLN--- 253
            ||             :||  .:...|.:|..:| :.|:.|..|....||... .:..:..||   
Zfish   412 LGGSLPGGQPSAPNINPPSQIDPSSIERAYAALGLTYQGNQASNQNQQTSVP-GQPGMRSLNNMA 475

  Fly   254 ----------------------------HYNFES---------------------PSTRRGDLTH 269
                                        |.|..:                     ||.......|
Zfish   476 GGNSMGVNGGVGAPMSNQHPGMLPDGMLHRNMTAQSLMNDSSGVGNMGSAATATPPSAGMRKSWH 540

  Fly   270 EDAS----NYKINYTRWLVFCHVPAFCNSLRQCETSLVFGRTLLRTVFQCMSQQLK-KKCISERD 329
            ||.:    |:.::.....:|..........|:.|..:.:.|.:...:::..:.:.: ...::|: 
Zfish   541 EDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANSRAEYYHLLAEK- 604

  Fly   330 RFPEDKRSIITLMPKFLETLRAELLKDDSPIWDTSYRPSNSFVIQQRKRNQEVANV--PIGPSAA 392
                    |..:..:..|..|..|.|.|.|..|.|       ::|....:|.|..:  |.|...:
Zfish   605 --------IYKIQKELEEKRRTRLQKQDGPHSDPS-------LVQATGPSQMVNRMQNPAGMPHS 654

  Fly   393 SIGGNKRTSVG--EPLHKR-------------IKKEPTDRPSSENLDDLPADVV----------- 431
            ..|.|:...||  :|:.:|             :..:.|.|.:..|:..|....:           
Zfish   655 LNGMNQFGQVGMQQPMGQRATPPLPMGANLNQMSMQGTPRMAQPNVPQLQNQYMQNQFTGTGAGL 719

  Fly   432 --------------------MRAMKSVSESKTTNKAEILFPVNVSR------DENVKAEEQKRAI 470
                                |....|:|......:::...||:.:.      ..|......:..:
Zfish   720 GQGAVGLNQPAGQGAMPQNQMPTPPSLSVHSPVAQSQSSVPVSGAAAGPQGPPSNHPPPAPQPGL 784

  Fly   471 EFHV---------VGNSLT-KPVDKQTVLWLLGLQLVF-------------AYQLPEMPREYISQ 512
            ..|.         ...||| .|...||...|.|.|...             |.|||.|     :|
Zfish   785 HTHCPPLRQNSPSPARSLTPTPAPHQTPPQLPGNQTPQPHTPNSSTTMAPPASQLPPM-----AQ 844

  Fly   513 LVFDTKHKTLALIKENQPIGGICFRPFPSQGFTEIVFCAVTMSEQVKGYGTHLMNHLKDYSIQRG 577
            .|...|...|    :.|..||      .:.|..:....:...|:...|..||..:.|.       
Zfish   845 GVASEKSSQL----QQQSHGG------GATGGPQTGLASSVPSQNAHGLCTHPHSPLS------- 892

  Fly   578 IKHLLTFADCDAIGYFKKQGFSKDIKLARPVYAGYIKEYDSATLMHCELHPSIVNTQFIAVIRSQ 642
                            :|...:.|.:.:.|           |::...:....:.:::..|.:.|:
Zfish   893 ----------------QKSSATVDGQASTP-----------ASVSSADPSSQLTSSEPTAPLDSK 930

  Fly   643 SEILK------------------------ELIAQRHNEVQKVRP-GLTCFKEGLPVIPVESIPGL 682
            :|:.:                        |:.::...|::|..| |..|..|.:.....|     
Zfish   931 TEVKQQDEEEENENETEDKASGKMAAMQTEIKSEEKPEIKKEEPAGDECKTEPMETSTAE----- 990

  Fly   683 REIGWKPQNRPARSSRPLEEST-----------------DPEKLATSFASVLQSV-RQHTTAWPF 729
                   ..:|...:.|.||..                 .|::|..:....|::: ||...:.||
Zfish   991 -------DKKPEVKTEPKEEEVAGANSTPANTQSKKKEFKPDELRQALMPTLEALYRQDPESLPF 1048

  Fly   730 LRPV--TAAEVP-----------DYYDHIKYPMDLKTMGERLKKGYYQTRRLFMADMARIFSNCR 781
            .:||  ....:|           ||:|.:|.|:||.|:..:|..|.||....::.|:..:|:|..
Zfish  1049 RQPVDPQLLGIPVRIRTSNKTNLDYFDIVKNPIDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAW 1113

  Fly   782 FYNSPDTEYYRCANSLERYFQTK----MRELG 809
            .||...:..|:..:.|...|:.:    |:|||
Zfish  1114 LYNRKTSRVYKYCSKLAEVFEQEIDPVMQELG 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn5NP_648586.2 PCAF_N 73..322 CDD:283997 49/329 (15%)
COG5076 451..807 CDD:227408 81/444 (18%)
Acetyltransf_1 526..598 CDD:278980 10/71 (14%)
Bromo_gcn5_like 708..808 CDD:99941 30/117 (26%)
ep300bXP_009297682.1 zf-TAZ 318..385 CDD:280324 13/82 (16%)
KIX 534..614 CDD:280354 10/88 (11%)
Bromo_cbp_like 1024..1142 CDD:99927 30/117 (26%)
RING_CBP-p300 1154..1236 CDD:276805
PHD_SF 1237..1271 CDD:304600
HAT_KAT11 1300..1607 CDD:285432
ZZ_CBP 1663..1703 CDD:239077
ZnF_TAZ 1724..1802 CDD:214717
Creb_binding <2164..2231 CDD:286163
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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