DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcn5 and bptf

DIOPT Version :9

Sequence 1:NP_648586.2 Gene:Gcn5 / 39431 FlyBaseID:FBgn0020388 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_009297692.1 Gene:bptf / 324479 ZFINID:ZDB-GENE-030131-3200 Length:2900 Species:Danio rerio


Alignment Length:781 Identity:153/781 - (19%)
Similarity:254/781 - (32%) Gaps:297/781 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SVPAEGTRQNSLQRIQQRKQKVFNLPV------PQKLAKLSMYSACQSEGCRCTGWKTPQENRHR 118
            |||  |.:|..|..||.:........|      ||:: ||.:....|.:|       ..|...|:
Zfish  2366 SVP--GLQQQVLSHIQSQVAAQIQAQVGTTAGMPQQI-KLQLPIQIQQQG-------GGQVQAHQ 2420

  Fly   119 DVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSSMNELLGAIIDMENLFMSMQRVEDEDTKK 183
                                      |.:|..|.::|:.|.|..|         .|..|.:..||
Zfish  2421 --------------------------IQNLVTIQTASVQEQLQRI---------QQLCEQQQQKK 2450

  Fly   184 VYQYLFRLLRQCVLTRQQAVIRGPLGDPPFETPCITKAVLSLVFYKYNHLSTPEL--QTMTEVAK 246
                     :|....|:||                           ..|:|..:|  :.:.:...
Zfish  2451 ---------KQQEAKREQA---------------------------QQHVSQSDLIQKQVAQKQN 2479

  Fly   247 TFLNFLNHYNFESPSTRRGDLTHEDASNYKINYTRWLVFCHVPAFCNSLRQCETSLVFGRTLLRT 311
            ..:..|......:|:.|..:             .|.:|       ||.:.         :.:|..
Zfish  2480 VAIEQLKQKKTMTPAEREEN-------------QRMIV-------CNQVM---------KFILDK 2515

  Fly   312 VFQCMSQQLKKKCISERDRFPEDKRS------IITLMPKFLETLRAELLK-----DDSPIWDTSY 365
            :.:...|..||:   :|:...|.|||      :..|:.|..|.|:|::||     |.........
Zfish  2516 IDKDERQAAKKR---KREESVEQKRSKQNASKLSALLFKHKEQLKADILKKRALLDKELQLQVQE 2577

  Fly   366 RPSNSFVIQQRKRNQEVANVPIGPSAASIGGNKRTSVGEPL-------------HKRIKKEPTD- 416
            ......:..:|::.:..|......:||:......|.|...|             |||.::|..| 
Zfish  2578 ELKRDLIKLRREKEKAQAAAAQAAAAAAAAAAASTHVHSGLSSYTGTVTSPTSTHKRKREEERDA 2642

  Fly   417 -RPSSENLDDLPADVVMRAMKSVSESKTTNKAEILFPVNVSRDENVKAEEQKRAIEFHVVGNSLT 480
             :|              :..|.:|   ||:|                  :.||.|:.:.:..:  
Zfish  2643 AKP--------------KRKKMIS---TTSK------------------DSKRDIKLYCICKT-- 2670

  Fly   481 KPVDKQTVLWLLGLQLVFAYQLPEMPREYISQLVFDTKHKTLALIKENQPIGGICFRPFPSQGFT 545
             |.|:..  :.:|..|...:        |..:.|..|:.:..   |.:..|...|.|  ..:|.|
Zfish  2671 -PYDESK--FYIGCDLCSNW--------YHGECVGITEKEAK---KMDDYICSECKR--AQEGNT 2719

  Fly   546 EIVFCAVTMSEQVKGYGTHLMNHLKDYSIQRGIKHLLTFADCDAIGYFKKQGFSKDIKLARPVYA 610
            |.::|                                                     :.|..|.
Zfish  2720 EELYC-----------------------------------------------------ICRTPYD 2731

  Fly   611 GYIKEYDSATLMHCELHPSIVNTQFIAVIRSQSEILKELIAQRHNEVQKVRPGLTCFKEGLPVIP 675
                  :|...:.|:...:..:.:.:.:::|::..:.|.:..:....:.....||          
Zfish  2732 ------ESQFYIGCDRCQNWYHGRCVGILQSEATHIDEYVCPQCQSTEDAMTVLT---------- 2780

  Fly   676 VESIPGLREIGWKPQNRPARSSRPLEESTDPEKLATSFASVLQSVRQHTTAWPFLRPVTAAEVPD 740
                                   ||.:. |.|.|    ..:|:|::.|..|||||.||...:.||
Zfish  2781 -----------------------PLTDK-DYEGL----KRILRSLQSHKMAWPFLEPVDPNDAPD 2817

  Fly   741 YYDHIKYPMDLKTMGERLKKGYYQTRRLFMADMARIFSNCRFYNSPDTEYYRCANSLERYFQTKM 805
            ||..||.||||.||.||::|.:|.....|:|||.:||.|||:||..|:.:|:||..||.:|..|:
Zfish  2818 YYGIIKEPMDLSTMEERIQKRFYSKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEFLESFFVQKL 2882

  Fly   806 R 806
            :
Zfish  2883 K 2883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn5NP_648586.2 PCAF_N 73..322 CDD:283997 38/256 (15%)
COG5076 451..807 CDD:227408 76/356 (21%)
Acetyltransf_1 526..598 CDD:278980 8/71 (11%)
Bromo_gcn5_like 708..808 CDD:99941 46/99 (46%)
bptfXP_009297692.1 DDT 198..254 CDD:280886
WHIM1 296..345 CDD:292246
PHD1_BPTF 349..391 CDD:277034
WHIM2 414..439 CDD:292247
PP28 <1833..1881 CDD:287254
PHD2_3_BPTF 2665..2711 CDD:277035 9/61 (15%)
PHD2_3_BPTF 2723..2769 CDD:277035 7/104 (7%)
Bromo_gcn5_like 2785..2885 CDD:99941 48/104 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.