DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcn5 and Brd8

DIOPT Version :9

Sequence 1:NP_648586.2 Gene:Gcn5 / 39431 FlyBaseID:FBgn0020388 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_008770251.2 Gene:Brd8 / 291691 RGDID:1307003 Length:1206 Species:Rattus norvegicus


Alignment Length:529 Identity:112/529 - (21%)
Similarity:179/529 - (33%) Gaps:148/529 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 AASIGGNKRTSVGEPLHKRIKKEPTDRPSSENLDDLPADVVMRAMKSVSESKTTNKAEILFPVNV 455
            |||:...|....||.....:..||   |.||:.|............::.:|..::.|...|.|..
  Rat   712 AASLEEPKEEDQGEGYLSEMDNEP---PVSESDDGFSIHNATLQSHTLGDSIPSSPASSQFSVCS 773

  Fly   456 SRDENVKAEE-QKRAIEF-------HVVGNSLTKPVD---------------------------- 484
            ...|.::|:: .|:||..       |...|...:||.                            
  Rat   774 EDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDLSTIKKNIENGL 838

  Fly   485 -KQTVLWLLGLQLVF------------AYQLP-EMPREYI--------SQLVF------------ 515
             :.|..:...:.|:|            .|.:. ||.|:.:        :||:.            
  Rat   839 IRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQTSESGISAKSL 903

  Fly   516 ---DTKHKTLALIKENQPIGGICFRPFPSQGFTEIVFCAVTMSEQVKGY--GTHLMNHLKDYSIQ 575
               |:..|..|..|::.|:|.      |:...:..|.|.....:..:.|  .:.|.|        
  Rat   904 RGRDSTRKQDASEKDSVPMGS------PAFLLSLFVGCEWVWLDSGQDYPDDSELSN-------- 954

  Fly   576 RGIKHLLTFADCDAIGYFKKQGFSKDIKLARPVYAGYIKEYDSATLMHCELHPSIVNTQFIAVIR 640
                      ||.::  |.....|.|:.:      |..|:.:.|.:...||..|       :..|
  Rat   955 ----------DCRSL--FSSWDSSLDLDV------GSWKDSEDADVEADELEES-------SPER 994

  Fly   641 SQSEILKELI----AQRHNEVQKVRPGLTCFKEGL-----------PVIPVESIPGLRE--IGWK 688
            ..||:|.:.:    .|...:.|:....|...:|.|           .....|..|.|.|  .|.:
  Rat   995 ESSELLVDDMESGEPQEEQDTQQNLLHLLSEEEALQDSKETGQGEGDASDGEDTPPLGEGRDGVR 1059

  Fly   689 PQNRP--------ARSSRPLEEST-DPEK----LATSFASVLQSVRQHTTAWPFLRPVTAAEVPD 740
            .|..|        :.||:..:.|. ||.:    ...:...|.:.:..|..:.|||:||:..:.|.
  Rat  1060 VQEAPLVNILYNCSNSSQLSDLSQGDPTQDHFLFKKTLLQVWKMIASHRFSSPFLKPVSEKQAPG 1124

  Fly   741 YYDHIKYPMDLKTMGERLKKGYYQTRRLFMADMARIFSNCRFYNSPDTEYYRCANSLERYFQTKM 805
            |.|.:|.||||.|:...|.||...|...|..|:..:|.|...||..|...|..|..::|....::
  Rat  1125 YKDVVKRPMDLTTLKRNLSKGRIHTMAEFQRDLMLMFQNAVMYNDSDHHIYHMAVEMQREVLEQI 1189

  Fly   806 RELGLW-DK 813
            :.|..| ||
  Rat  1190 QVLSTWLDK 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn5NP_648586.2 PCAF_N 73..322 CDD:283997
COG5076 451..807 CDD:227408 94/460 (20%)
Acetyltransf_1 526..598 CDD:278980 12/73 (16%)
Bromo_gcn5_like 708..808 CDD:99941 30/103 (29%)
Brd8XP_008770251.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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