DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gcn5 and Brd2

DIOPT Version :9

Sequence 1:NP_648586.2 Gene:Gcn5 / 39431 FlyBaseID:FBgn0020388 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001191902.1 Gene:Brd2 / 14312 MGIID:99495 Length:798 Species:Mus musculus


Alignment Length:150 Identity:47/150 - (31%)
Similarity:72/150 - (48%) Gaps:6/150 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   661 RPGLTCFKEGLPVIPVESIPGLREIGWKPQNRPARSSRPLEESTDPEKLATSFASVLQSVRQHTT 725
            :|.|  ..||.....:.|:|.|:.....|.  |...|.|.:......:|......|::::.:|..
Mouse    34 KPSL--LYEGFESPTMASVPALQLAPANPP--PPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQF 94

  Fly   726 AWPFLRPVTAAE--VPDYYDHIKYPMDLKTMGERLKKGYYQTRRLFMADMARIFSNCRFYNSPDT 788
            ||||.:||.|.:  :|||:..||.|||:.|:..||:..||......|.|...:|:||..||.|..
Mouse    95 AWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 159

  Fly   789 EYYRCANSLERYFQTKMREL 808
            :....|.:||:.|..|:..:
Mouse   160 DIVLMAQTLEKIFLQKVASM 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn5NP_648586.2 PCAF_N 73..322 CDD:283997
COG5076 451..807 CDD:227408 47/147 (32%)
Acetyltransf_1 526..598 CDD:278980
Bromo_gcn5_like 708..808 CDD:99941 36/101 (36%)
Brd2NP_001191902.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72 5/20 (25%)
Bromo_Brdt_I_like 73..179 CDD:99929 36/105 (34%)
PHA03247 <215..332 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..348
Bromo_Brdt_II_like 348..449 CDD:99930
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 454..645
Nuclear localization signal. /evidence=ECO:0000255 553..557
BET 639..701 CDD:407211
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..798
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.