DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gcn5 and brd2

DIOPT Version :9

Sequence 1:NP_648586.2 Gene:Gcn5 / 39431 FlyBaseID:FBgn0020388 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_012809277.2 Gene:brd2 / 100038037 XenbaseID:XB-GENE-481598 Length:778 Species:Xenopus tropicalis


Alignment Length:372 Identity:83/372 - (22%)
Similarity:132/372 - (35%) Gaps:125/372 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 KPVDKQTVLWLLGLQLVFAYQLPEMPREYISQLVFDT--KHKTLALIKENQPIGGICFRPFPSQG 543
            ||.| ..||....|:.:|..::.:||:|  .|.:.:|  |.|.:.:.|.:.|.||          
 Frog   157 KPTD-DIVLMAQSLEKMFLQKVAQMPQE--EQEIPNTASKIKNVKISKTSGPTGG---------- 208

  Fly   544 FTEIVFCAVTMSEQVKGYGTHLMNHLKDYSIQRGIKHLLTFADCDAIGYFKKQGFSKDIKLARPV 608
                    ||.:.||                                                |.
 Frog   209 --------VTTAHQV------------------------------------------------PA 217

  Fly   609 YAGYIKEYDSA----TLMHCELHPSIVNTQFIAVIRSQSEILKELIAQRHNEVQKVRPGLT---C 666
            .:.....|.|:    |.|....|.||::...:..:.|...:|            .|.||.|   .
 Frog   218 VSSQSSLYPSSPEVPTTMLSLAHSSIISNPVLKSMPSSQAVL------------SVLPGATQPVA 270

  Fly   667 FKEGLP-------------VIPVESIPGLREIGWKPQNRPAR--SSRPL----EESTDPEKLATS 712
            .|:|:.             :.....:..|:....||...|||  |.||:    ::..|.::..||
 Frog   271 KKKGVKRKADTTTPTTTAIIATSGDLSPLQASETKPAKIPARRESGRPIKPPKKDLPDSQQHQTS 335

  Fly   713 --------------FASVLQSVRQHTTAWPFLRP--VTAAEVPDYYDHIKYPMDLKTMGERLKKG 761
                          ....|.|.:....||||.:|  |:|..:.||||.||:||||.|:.:::...
 Frog   336 KKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNR 400

  Fly   762 YYQTRRLFMADMARIFSNCRFYNSPDTEYYRCANSLERYFQTKMREL 808
            .::..:.|.|.:..:||||..||.||.:....|..|:..|:.:..::
 Frog   401 EFKDAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gcn5NP_648586.2 PCAF_N 73..322 CDD:283997
COG5076 451..807 CDD:227408 83/369 (22%)
Acetyltransf_1 526..598 CDD:278980 8/71 (11%)
Bromo_gcn5_like 708..808 CDD:99941 35/115 (30%)
brd2XP_012809277.2 Bromo_Brdt_I_like 74..180 CDD:99929 7/23 (30%)
Bromo_Brdt_II_like 343..444 CDD:99930 33/100 (33%)
BET 610..674 CDD:407211
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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