DRSC/TRiP Functional Genomics Resources

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Protein Alignment tral and DCP5-L

DIOPT Version :9

Sequence 1:NP_001261775.1 Gene:tral / 39430 FlyBaseID:FBgn0041775 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_199346.1 Gene:DCP5-L / 834569 AraportID:AT5G45330 Length:571 Species:Arabidopsis thaliana


Alignment Length:651 Identity:163/651 - (25%)
Similarity:234/651 - (35%) Gaps:198/651 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LGSKISLISKADIRYEGRLYTVDPQECTIALSSVRSFGTEDRDTQF-QIAPQSQIYDYILFRGSD 71
            :||.||||||.:|||||.||.::.|:.|:.|.:|||.|||.|.... ||.|..::||||||||||
plant    34 IGSFISLISKYEIRYEGILYHLNVQDSTLGLKNVRSCGTEGRKKDGPQIPPCDKVYDYILFRGSD 98

  Fly    72 IKDIRV-----------------VNNHTLPHHNDPAIMQAQLQN-----GPPQMPQHFPMPSGMS 114
            |||::|                 ||..  ||......|.:.:..     |..:..|....|:..|
plant    99 IKDLQVNPSPSAQSRQEIQSEQDVNQS--PHSRPAMTMSSPISGYDSGYGLGRGSQWINTPALSS 161

  Fly   115 GP---PQQQQVP-SQQPPQMPSGG----------GSGGAGGAGAPGGGGPGYGNGNPFGNLGGPN 165
            .|   .|...|| |.|||...:|.          .:....|:..|   .|.:..||.|.:.|.| 
plant   162 KPVPVTQHSSVPLSFQPPSANAGSLTESPVSLIDSTQSNAGSSMP---IPSFVQGNKFASSGVP- 222

  Fly   166 LANMVGNAGGSLAPGSGAPG--------SGPFMHIGGNQQQPKPQQQKQPISVLDMLAGASRSTT 222
                :|.....::..|..|.        |.|.|.:..:..|...:..       |:.:..|.|:.
plant   223 ----LGMMQKPVSSSSTIPNGPQIIDYFSSPIMGLVDDSSQVVTRSP-------DVSSNQSYSSN 276

  Fly   223 PISLIVSPTAELTQQQQLHQQQNAGQGGNGRDAGHKRQNHQQQQNQQHQQRGGPSHNNMQQQQQR 287
            |     ||..    |.|||...     |....:.:.....:.|.:..:.|:..||...       
plant   277 P-----SPLG----QTQLHTPP-----GLASVSSNLSPPSEAQLSAPNIQKIYPSAPQ------- 320

  Fly   288 GGGSGTDFYNQQRD--RRDSGRQMDNNYSN--------------NYNNNNNNQRNRGGGNGMQQQ 336
              ..|...|:.|.:  .|....::....||              ::.:.:.:.::|     .|..
plant   321 --AIGKVVYDPQSNHPHRSIPHELPAVASNSAPVIPGPLSKSPESFFDMDPSLQSR-----QQMV 378

  Fly   337 QRGGNGGSGGGGGNGGGNNPAWNMHRGNQNSNNMMNMRNRGMGSR--GPMRPNQGYRPQSANNQN 399
            .||..        .....|||            ..|:.::....|  .|:.|    .|.||:...
plant   379 YRGQE--------MFAATNPA------------SANVPSQSFAPRNHAPLLP----LPVSAHQSR 419

  Fly   400 KPRNKIKFEGDFDFEQANNKFE--ELRSQLAKLKVAEDGAPKPATNATAATATATNEQVGEKVEG 462
            .|.:.|::..:||||..|.||:  ||...|.:                       |.|       
plant   420 IPSSSIEYTEEFDFEAMNEKFKKSELWGYLGR-----------------------NNQ------- 454

  Fly   463 VHTLNGETDKKDDSGNETGAGEHEPEEDDVAVCYDKTKSFFDNISCEAAQ--DRSKNKKNDWRQE 525
                    ..::|.|.||..   ||..:. ...|:| ..|||.|||....  .||..:.|.:.:.
plant   455 --------RNQNDYGEETAI---EPNAEG-KPAYNK-DDFFDTISCNQLDRVARSGQQHNQFPEH 506

  Fly   526 RKLNTETFGVSSTR-------RG------SSYRGRNQYYNNNGNGGI-NSGYG---GAPGYNRNN 573
            .:...|.||.:..|       :|      ::|||  .|:|||.|... |||||   |..|..||.
plant   507 MRQVPEAFGNNFQRPPPLQPGQGAYLAAQTNYRG--GYHNNNNNNYYSNSGYGYYSGGRGRGRNT 569

  Fly   574 Y 574
            :
plant   570 H 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tralNP_001261775.1 LSm14_N 4..77 CDD:212483 41/69 (59%)
FDF 406..536 CDD:286601 32/133 (24%)
DCP5-LNP_199346.1 LSm14_N 30..104 CDD:212483 41/69 (59%)
FDF 426..517 CDD:286601 32/133 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 79 1.000 Domainoid score I3025
eggNOG 1 0.900 - - E1_KOG1073
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1638
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1569369at2759
OrthoFinder 1 1.000 - - FOG0001497
OrthoInspector 1 1.000 - - otm3464
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13586
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.930

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