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Protein Alignment tral and AT4G19275
DIOPT Version :9
Sequence 1: | NP_001261775.1 |
Gene: | tral / 39430 |
FlyBaseID: | FBgn0041775 |
Length: | 657 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001328104.1 |
Gene: | AT4G19275 / 827674 |
AraportID: | AT4G19275 |
Length: | 208 |
Species: | Arabidopsis thaliana |
Alignment Length: | 85 |
Identity: | 27/85 - (31%) |
Similarity: | 51/85 - (60%) |
Gaps: | 7/85 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LGSKISLISKADIRYEGRLYTVDPQECTIALSS-VRSFGTE-DRDTQ---FQIAPQSQIYDYILF 67
:|..::::|..||||||.:..::.|:..:.|.: ||.:|.| :.|.: ||:. .:::.:::|
plant 20 IGKFVAVMSNNDIRYEGVISLLNLQDSKLGLQNVVRVYGREVENDNEQRVFQVL--KEVHSHMVF 82
Fly 68 RGSDIKDIRVVNNHTLPHHN 87
||||||.:.|::......||
plant 83 RGSDIKSVEVLSLPPPARHN 102
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tral | NP_001261775.1 |
LSm14_N |
4..77 |
CDD:212483 |
24/73 (33%) |
FDF |
406..536 |
CDD:286601 |
|
AT4G19275 | NP_001328104.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13586 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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