Protein Alignment tral and lsm14b

DIOPT Version :9

• Sequence 1: NP_001261775.1
• Gene: tral / 39430
• FlyBaseID: FBgn0041775
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_956465.2
• Gene: lsm14b / 393140
• ZFINID: ZDB-GENE-040426-779
• Length: 380
• Species: Danio rerio
• Alignment Length: 630
• Identity: 169/630 - (26%)
• Similarity: 221/630 - (35%)
• Gaps: 263/630 - (41%)

  Fly     1 MSGGLPELGSKISLISKADIRYEGRLYTVDPQECTIALSSVRSFGTEDRDTQFQIAPQSQIYDYI 65
            ||.|.|.:||||||||||.|||||.|||:|....|:||:.|||||||.|.|...:..:.:|::||
Zfish     1 MSSGTPYIGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEGRPTDRPVPARDEIFEYI 65

  Fly    66 LFRGSDIKDIRVVN----NHTLPHHNDPAIMQAQLQNGPPQMPQHFPMPSGMSGPPQQQQVPSQQ 126
            :|||||||||.|..    :|.||  .||||:|:.:  |...:  |:|..|..|  |.:..:|:
Zfish    66 IFRGSDIKDITVCEPLKVHHGLP--QDPAIVQSSV--GTSSV--HYPSQSSYS--PYRGVLPA-- 120

  Fly   127 PPQMPSGGGSGGAGGAGAPGGGGPGYGNGNPFGNLGGPNLANMVGNAGGSLAPGSGAPGSGPFMH 191
                                           :..|           |..||.....|...|..:|
Zfish   121 -------------------------------YNQL-----------AASSLFSQQYAAALGLGLH 143

  Fly   192 IGGNQQQPKPQQQKQPISVLDMLAGASRSTTPISLIVSPTAELTQQQQLHQQQNAGQGGNGRDAG 256
            ....::.|..:|..|              |.|        ||.||||   |||....||.
Zfish   144 GVSGRRGPMVEQAVQ--------------TVP--------AEKTQQQ---QQQKKSLGGG----- 178

  Fly   257 HKRQNHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFYNQQRDRRDSGRQMDNNYSNNYNNNN 321
                           |:||         .|||.
Zfish   179 ---------------QQGG---------AQRGA-------------------------------- 187

  Fly   322 NNQRNRGGGNGMQQQQRGGNGGSGGGGGNGGGNNPAWNMHRGNQNSNNMMNMRNRGMGSRGPMRP 386
              :..||..:..||....|...:     |.....|......|.:.|      ||||.|
Zfish   188 --RAQRGDSSSAQQAVLKGQSPA-----NNENKPPTSRRKPGTRRS------RNRGQG------- 232

  Fly   387 NQGYRPQSANNQNKPRNKIKFEGDFDFEQANNKF--EELRSQLAKLKVAEDGAPKPATNATAATA 449
                  |......|| :.::||.|||||.||.:|  ::|..::......::....|..::..
Zfish   233 ------QLLVGSTKP-STLQFEADFDFETANAQFNKDDLEKEIEDQNSVQEPRSPPEEHSAV--- 287

  Fly   450 TATNEQVGEKVEGVHTLNGETDKKDDSGNETGAGEHEPEEDDV--AVC-YDKTKSFFDNISCEAA 511
                ||                :|.||.:|:.|      |||.  ..| |:|.||||||||.|.
Zfish   288 ----EQ----------------QKQDSEHESAA------EDDPLGPKCFYNKAKSFFDNISSEL- 325

  Fly   512 QDRSKNKKNDWRQERKLNTETFGVSSTRRGSSYRGRNQYYNNNGNGGINSGYGGAPGYNRNNYRM 576
                ::::..|.:|||||.|||||                               ||    .|..
Zfish   326 ----RSRRTTWAEERKLNVETFGV-------------------------------PG----RYLR 351

  Fly   577 GGGGGNFRNRSNNRNNGGGRGGNGMPNITNGNTAAALKAANNAAG 621
            .||...|          |||.|.|          ||.:...:.||
Zfish   352 AGGFRGF----------GGRRGRG----------AAQRTLTHRAG 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tral	NP_001261775.1	LSm14_N	4..77	CDD:212483	45/72 (63%)
		FDF	406..536	CDD:286601	44/134 (33%)
lsm14b	NP_956465.2	LSM14	6..80	CDD:289471	45/73 (62%)
		FDF	245..346	CDD:286601	45/165 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170589257
Domainoid	1	1.000	98	1.000	Domainoid score	I7108
eggNOG	1	0.900	-	-		E1_KOG1073
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	177	1.000	Inparanoid score	I4031
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1569369at2759
OrthoFinder	1	1.000	-	-		FOG0001497
OrthoInspector	1	1.000	-	-		otm26607
orthoMCL	1	0.900	-	-		OOG6_113377
Panther	1	1.100	-	-	LDO	PTHR13586
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2277
SonicParanoid	1	1.000	-	-		X1222
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	12	11.880