Protein Alignment tral and Lsm14b

DIOPT Version :10

• Sequence 1: NP_001261775.1
• Gene: tral / 39430
• FlyBaseID: FBgn0041775
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: NP_001359293.1
• Gene: Lsm14b / 241846
• MGIID: 3040677
• Length: 424
• Species: Mus musculus
• Alignment Length: 619
• Identity: 192/619 - (31%)
• Similarity: 236/619 - (38%)
• Gaps: 219/619 - (35%)

  Fly     1 MSG--GLPELGSKISLISKADIRYEGRLYTVDPQECTIALSSVRSFGTEDRDTQFQIAPQSQIYD 63
            |||  |.|.|||||||||||.|||||.|||:|....|:||:.|||||||||.|.....|:.:||:
Mouse     1 MSGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEIYE 65

  Fly    64 YILFRGSDIKDIRVVN----NHTLPHHNDPAIMQAQLQNGPPQMPQHFPMPSGMSGPPQQQQVPS 124
            ||:|||||||||.|..    .||||  .||||:|:.|              ...|..|.|..||.
Mouse    66 YIIFRGSDIKDITVCEPPKAQHTLP--QDPAIVQSSL--------------GSASASPFQPHVPY 114

  Fly   125 QQPPQMPSGGGSGGAGGAGAPGGGGPGYGNGNPFGNLGGPNLANMVGNAGGSL----APGSGAPG 185
                               :|..|.|      |:|.|...:|.:....|...|    :|.:.|..
Mouse   115 -------------------SPFRGMP------PYGQLAASSLLSQQYAASLGLEKLVSPPASAAA 154

  Fly   186 SGPFMHIGGNQQQPKPQQQKQPISVLDMLA--------GASRSTTPISLIVSPTAELTQQQQLHQ 242
            |.|       ...|.|    ||:|.|||.:        ||...:||:.  .||..|...|.....
Mouse   155 SSP-------SSSPSP----QPVSELDMSSEPPQLTCKGAGFPSTPVG--KSPMVEQAVQTSSVD 206

  Fly   243 QQNAGQGGNGRDAGHKRQNHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFYNQQRDRRDSGR 307
            ..||     .:....|..:..|...:|.|....|:.:.:|.......|...| .|::..||.||
Mouse   207 NLNA-----KKLLPSKVTSATQLNGRQAQPSSKPASDVVQPAPVHTQGQVND-ENRRPPRRRSG- 264

  Fly   308 QMDNNYSNNYNNNNNNQRNRGGGNGMQQQQRGGNGGSGGGGGNGGGNNPAWNMHRGNQNSNNMMN 372
                         |...|||
Mouse   265 -------------NRRTRNR--------------------------------------------- 271

  Fly   373 MRNRGMGSRGPMRPNQGYRPQSANNQNKPRNKIKFEGDFDFEQANNKF--EELRSQL-AKLKVAE 434
                   |||..||.           |...|.||||||||||.||.:|  |||..:. .||...:
Mouse   272 -------SRGQNRPT-----------NVKENTIKFEGDFDFESANAQFNREELDKEFKKKLNFKD 318

  Fly   435 DGAPKPATNATAATATATNEQVGEKVEGVHTLNGETDKKDDSGNETGAGEHEPEEDDVAV-C-YD 497
            |.|.|                 ||:.:.......|         ||.|     |||.:.. | ||
Mouse   319 DKADK-----------------GEEKDPAVMAQSE---------ETAA-----EEDLLGPNCYYD 352

  Fly   498 KTKSFFDNISCEAAQDRSKNKKNDWRQERKLNTETFGVSSTRRGSSYRGRNQYYNNNGNGGINSG 562
            |:||||||||.|.   ::.:::..|.:||||||||||||    |...|||:
Mouse   353 KSKSFFDNISSEL---KTSSRRTTWAEERKLNTETFGVS----GRFLRGRS-------------- 396

  Fly   563 YGGAPGYNRNNYRMGGGGGNFRNRSNNRNNGGGR 596
                   :|..:|.|.|.|..|....:...|.||
Mouse   397 -------SRGGFRGGRGNGTTRRNPTSHRAGTGR 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tral	NP_001261775.1	LSm14_N	4..77	CDD:212483	49/72 (68%)
		FDF	405..537	CDD:430668	55/136 (40%)
Lsm14b	NP_001359293.1	LSm14_N	6..79	CDD:212483	49/72 (68%)
		FDF	286..388	CDD:430668	54/135 (40%)