Protein Alignment tral and Lsm14b

DIOPT Version :9

• Sequence 1: NP_001261775.1
• Gene: tral / 39430
• FlyBaseID: FBgn0041775
• Length: 657
• Species: Drosophila melanogaster
• Sequence 2: XP_006500681.1
• Gene: Lsm14b / 241846
• MGIID: 3040677
• Length: 475
• Species: Mus musculus
• Alignment Length: 626
• Identity: 185/626 - (29%)
• Similarity: 228/626 - (36%)
• Gaps: 259/626 - (41%)

  Fly     1 MSG--GLPELGSKISLISKADIRYEGRLYTVDPQECTIALSSVRSFGTEDRDTQFQIAPQSQIYD 63
            |||  |.|.|||||||||||.|||||.|||:|....|:||:.|||||||||.|.....|:.:||:
Mouse    78 MSGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEIYE 142

  Fly    64 YILFRGSDIKDIRVVN----NHTLPHHNDPAIMQAQLQNGPPQMPQHFPMPSGMSGPPQQQQVPS 124
            ||:|||||||||.|..    .||||  .||||:|:.|              ...|..|.|..||.
Mouse   143 YIIFRGSDIKDITVCEPPKAQHTLP--QDPAIVQSSL--------------GSASASPFQPHVPY 191

  Fly   125 QQPPQMPSGGGSGGAGGAGAPGGGGPGYGNGNPFGNLGGPNLANMVGNAGGSL----APGSGAPG 185
                               :|..|.|      |:|.|...:|.:....|...|    :|.:.|..
Mouse   192 -------------------SPFRGMP------PYGQLAASSLLSQQYAASLGLEKLVSPPASAAA 231

  Fly   186 SGPFMHIGGNQQQPKPQQQKQPISVLDMLA--------GASRSTTPISLIVSPTAELTQQQQLHQ 242
            |.|       ...|.|    ||:|.|||.:        ||...:||:.  .||..|...|.
Mouse   232 SSP-------SSSPSP----QPVSELDMSSEPPQLTCKGAGFPSTPVG--KSPMVEQAVQT---- 279

  Fly   243 QQNAGQGGNGRDAGHKRQNHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFYNQQR---DRRD 304
                                                            |..|..|.::   .:..
Mouse   280 ------------------------------------------------SSVDNLNAKKLLPSKVT 296

  Fly   305 SGRQMDNNYSNNYNNNNNNQRNRGGGNGMQQQQRGGNGGSGGGGGNGGGNNPAWNMHRGNQNSNN 369
            |..|:                     ||.|.|.               .:.||    .||:.:
Mouse   297 SATQL---------------------NGRQAQP---------------SSKPA----SGNRRT-- 319

  Fly   370 MMNMRNRGMGSRGPMRPNQGYRPQSANNQNKPRNKIKFEGDFDFEQANNKF--EELRSQL-AKLK 431
                |||   |||..||.           |...|.||||||||||.||.:|  |||..:. .||.
Mouse   320 ----RNR---SRGQNRPT-----------NVKENTIKFEGDFDFESANAQFNREELDKEFKKKLN 366

  Fly   432 VAEDGAPK-----PATNATAATATATNEQVGEKVEGVHTLNGETDKKDDSGNETGAGEHEPEEDD 491
            ..:|.|.|     ||..|.:....|..:.:|..
Mouse   367 FKDDKADKGEEKDPAVMAQSEETAAEEDLLGPN-------------------------------- 399

  Fly   492 VAVC-YDKTKSFFDNISCEAAQDRSKNKKNDWRQERKLNTETFGVSSTRRGSSYRGRNQYYNNNG 555
               | |||:||||||||.|.   ::.:::..|.:||||||||||||    |...|||:
Mouse   400 ---CYYDKSKSFFDNISSEL---KTSSRRTTWAEERKLNTETFGVS----GRFLRGRS------- 447

  Fly   556 NGGINSGYGGAPGYNRNNYRMGGGGGNFRNRSNNRNNGGGR 596
                          :|..:|.|.|.|..|....:...|.||
Mouse   448 --------------SRGGFRGGRGNGTTRRNPTSHRAGTGR 474

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tral	NP_001261775.1	LSm14_N	4..77	CDD:212483	49/72 (68%)
		FDF	406..536	CDD:286601	49/138 (36%)
Lsm14b	XP_006500681.1	LSm14_N	83..156	CDD:212483	49/72 (68%)
		FDF	338..439	CDD:370547	49/138 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167844355
Domainoid	1	1.000	97	1.000	Domainoid score	I7231
eggNOG	1	0.900	-	-		E1_KOG1073
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	205	1.000	Inparanoid score	I3724
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001497
OrthoInspector	1	1.000	-	-		otm42423
orthoMCL	1	0.900	-	-		OOG6_113377
Panther	1	1.100	-	-	LDO	PTHR13586
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2277
SonicParanoid	1	1.000	-	-		X1222
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	11	10.870