DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and AT5G09890

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_001031863.1 Gene:AT5G09890 / 830849 AraportID:AT5G09890 Length:516 Species:Arabidopsis thaliana


Alignment Length:589 Identity:168/589 - (28%)
Similarity:260/589 - (44%) Gaps:168/589 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GKGAGVCAKPAGSASGSGIPASTRRSI-VPVSTTSAAVAEAICR-------EGLLDAFCLLYNEC 77
            |....|..||     |.|....|..:: .||:...||.|:....       :||           
plant     3 GADGTVRVKP-----GRGFETETDVAVSSPVTRQKAAAAKQFIENHYKNYLQGL----------- 51

  Fly    78 DKDTLKKRDRNIAEFVNKFR----PIIEETRKLR----------------VNADDFLIKTLIGQG 122
             .:.:::|    .||..|.:    |:.|:...:|                :..|||.:.|:||:|
plant    52 -HERMERR----REFQRKVQEAQLPVEEQDEMMRNLARRETEYMRLQRRKIGIDDFELLTVIGKG 111

  Fly   123 YFGNVHLVVERQTNDIYAMKKIKKSVVTT----SQVKEERDIMSIRNSEWLINLQYAFQDNDNLY 183
            .||.|.|...|.|:::|||||:||:.:.:    ..|:.||::::..:|.:::.|.|:|||::.||
plant   112 AFGEVRLCRLRSTSEVYAMKKLKKTEMLSRGQVEHVRSERNLLAEVDSRYIVKLFYSFQDSECLY 176

  Fly   184 LVMEYMPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKL 248
            |:|||:||||:::|:.|.....||:||||:||..:|:|::|:..||||||||:|:::|:.||:||
plant   177 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKSGHLKL 241

  Fly   249 ADFGNAAALD-------------------------------------------RDGHVLSLSPVG 270
            :|||....||                                           |:...|:.|.||
plant   242 SDFGLCKPLDDKYSSLLLEDDEMLSQDSENQSGKSDADKAPWQMPKEQLLQWKRNRRALAYSTVG 306

  Fly   271 TPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSH 335
            |.||:|||:|       |.|...     :.||:||:|.|.||::....||..|:...|..||:  
plant   307 TLDYMAPEVL-------LKKGYG-----MECDWWSLGAILYEMLVGYPPFCSDDPRITCRKII-- 357

  Fly   336 CEESHLKELISFPADLKVSVNYRNLIESLVTNPSKRL---SYERIKNHPFFSEIPWGSIRSQVPP 397
                :.:..:.||.:.|:|...|:||..|:.:...||   ..|.||:||:|...||..:......
plant   358 ----NWRVCLKFPEEPKISDEARDLICRLLCDVDSRLGTRGVEEIKSHPWFKGTPWDKLYDMEAA 418

  Fly   398 IIPTVRSDDDTSNFE-----DGIRHKTRREQGVAKKSLTTNMKSNDFSGKDLPFIGYSFVHMEKS 457
            ..|.|..:.||.|||     :|...:. .:.|..:|.||:         ||..|||::|      
plant   419 YRPIVDGELDTQNFEKFPEVEGSPSEA-PQVGPWRKMLTS---------KDTNFIGFTF------ 467

  Fly   458 AISATTDEKLQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRKTDNKSQVVADAKMEIKKLQQI 522
                                          .|.|:.|:.:|....|.||....:|...|..|.:|
plant   468 ------------------------------KKSDITRSMESSGSADMKSNGSGEAPSLISLLGRI 502

  Fly   523 IKEK 526
            ..|:
plant   503 NMEE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 134/395 (34%)
S_TKc 113..383 CDD:214567 112/319 (35%)
Smc 487..1222 CDD:224117 12/40 (30%)
CNH 1503..1774 CDD:279162
AT5G09890NP_001031863.1 STKc_NDR_like 100..468 CDD:270750 135/431 (31%)
S_TKc 102..404 CDD:214567 112/319 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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