DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and Rock1

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_001376168.1 Gene:Rock1 / 81762 RGDID:620424 Length:1354 Species:Rattus norvegicus


Alignment Length:1664 Identity:408/1664 - (24%)
Similarity:685/1664 - (41%) Gaps:485/1664 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLIKTLIGQGYFGNVHLV 130
            |||....|..:.|...|:| ::||..|:::::..|.:.|.||:.|:|:.:..:||:|.||.|.||
  Rat    30 LLDGLDALVYDLDFPALRK-NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV 93

  Fly   131 VERQTNDIYAMKKIKK-SVVTTSQVK---EERDIMSIRNSEWLINLQYAFQDNDNLYLVMEYMPG 191
            ..:.|..:||||.:.| .::..|...   ||||||:..||.|::.|.|||||:..||:|||||||
  Rat    94 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 158

  Fly   192 GDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGNAAA 256
            |||::|||.: ...|..||||.||:.:||..:|.||::|||:||:|:|:|:.||:||||||....
  Rat   159 GDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222

  Fly   257 LDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFH 321
            ::::|.|...:.|||||||:||:|::        ...|......||:||:|:..||::...|||:
  Rat   223 MNKEGMVRCDTAVGTPDYISPEVLKS--------QGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279

  Fly   322 EDNVHETYSKILSHCEESHLKELISFPADLKVSVNYRNLIESLVTNPSKRL---SYERIKNHPFF 383
            .|::..|||||::|      |..::||.|..:|...:|||.:.:|:...||   ..|.||.|.||
  Rat   280 ADSLVGTYSKIMNH------KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 338

  Fly   384 --SEIPWGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSNDFSGKDLPF 446
              .:..|.::|..|.|::|.:.||.|||||:|....|...|.....|:         |.|..|||
  Rat   339 KNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGDEETFPIPKA---------FVGNQLPF 394

  Fly   447 IGYSF---------VHMEKSAISATTDEKLQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRKT 502
            :|:::         .:..::..|:..|:.:||.|::.:.||:.:.:....||.::   :|..| |
  Rat   395 VGFTYYSNRRYLPSANPSENRSSSNVDKNVQESLQKTIYKLEEQLHNEMQLKDEM---EQKCR-T 455

  Fly   503 DNKSQVVADAKMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEEMWSKKEATITDLLRLNRQ 567
            .|            .||.:|:||                    :|||.              |::
  Rat   456 SN------------IKLDKIMKE--------------------LDEEG--------------NQR 474

  Fly   568 KYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEE----CKHLSMKLQNYKDMLQQ 628
            :..|:.::..:: ||.|             |..|..|:..|.|:    .:::..::...||.|:.
  Rat   475 RNLESAVSQIEK-EKML-------------LQHRINEYQRKVEQENEKRRNVENEVSTLKDQLED 525

  Fly   629 IKEQNLKSETNHEEQRRQMAELYEQKLTDLRKKVRDSQDTNRRMTMEIKEIRTELDESISSSKS- 692
            :::.:            |.::|..:|||.|:|::.::.|.          :|||.|.::...|| 
  Rat   526 LRKAS------------QSSQLANEKLTQLQKQLEEANDL----------LRTESDTAVRLRKSH 568

  Fly   693 TQEAKNATERNIEEILRRLNEEIASNNELHAEKVKLETKLQLKENETQEVRAECHRLERELQLAE 757
            |:.:|:.::      |..||.|:...|             ::.||...:...:.:          
  Rat   569 TEMSKSVSQ------LESLNRELQERN-------------RMLENSKSQADKDYY---------- 604

  Fly   758 CRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLLAAKESENHQKGRADQLQTLVTKLEQM 822
                                            ||:|.|.|.:....|.......||..:|.|::.
  Rat   605 --------------------------------QLQAVLEAERRDRGHDSEMIGDLQARITSLQEE 637

  Fly   823 LERFNEQSLSPTKSHSSRKQEGE--TVGDML---ERQNEKLEDKLAAVREQMIVERQAARTANLS 882
            ::..         .|:..:.|||  ...|||   |::...||..|                 |..
  Rat   638 VKHL---------KHNLERVEGERKEAQDMLNHSEKEKNNLEIDL-----------------NYK 676

  Fly   883 LWKVEKQLEEALSEKKLLARRMELTEDRIKKVQNASD----EAQRMLKTSQEETRQRESRIEELK 943
            |..::::||:.::|.|:...|:   .|:.:.::.|..    |.::.||..:|...:.|:|:.|.:
  Rat   677 LKSIQQRLEQEVNEHKVTKARL---TDKHQSIEEAKSVAMCEMEKKLKEEREAREKAENRVVETE 738

  Fly   944 QELAAAKRDVLKEHRQWEKAEQERMKCKSEIIEHLA-NVHRLEQQETELRQKLRQ-------IQS 1000
            ::.:....|:        |..|::       :|||. |..|||.....|..:|.|       :||
  Rat   739 KQCSMLDVDL--------KQSQQK-------LEHLTENKERLEDAVKSLTLQLEQESNKRILLQS 788

  Fly  1001 RFDGVTLEQKNTIRELQEEREKSRKAN---DSCLVLQKELKQLTDNFQRLKYACSITDSQLTEVE 1062
            .......|..| ::.|  |::..::.|   ::..:|:.||.|||..::.       .:.|:.|::
  Rat   789 ELKTQAFEADN-LKGL--EKQMKQEINTLLEAKRLLEFELAQLTKQYRG-------NEGQMRELQ 843

  Fly  1063 TMLKSEQERNKSQKSQLDTLHEKLRERNDQ----LTDLRKQLTTVESEKRLAEQRA---QVLASE 1120
            ..|::||..:...|:|:..|.|::.|:|.:    :.:|:.:..|:.::..|||.:|   |:....
  Rat   844 DQLEAEQYFSTLYKTQVKELKEEIEEKNRENLRKIQELQSEKETLSTQLDLAETKAESEQLARGI 908

  Fly  1121 IDELRLNLKEQQKKLVAQQDQ-----------LVEQTNALFATQERAELLDGQNANYEAQTADSN 1174
            ::|....|.::.||..::..|           |.|..|||  |:: .|||..:|       .:.|
  Rat   909 LEEQYFELTQESKKAASRNRQEITDKDHTVSRLEEANNAL--TKD-IELLRKEN-------EELN 963

  Fly  1175 REMVSLKEENARILSELFHKKEEVGNLQAEI-------RGLESAQANLHAEIDSLQD-------- 1224
            ..|.:.:||..      ..|:||:.||:|..       |.|::...|..|||.:.:|        
  Rat   964 ERMRTAEEEYK------LKKEEEISNLKAAFEKNISTERTLKTQAVNKLAEIMNRKDFKIDRKKA 1022

  Fly  1225 -----TLAEKEQFYVQRDI-----KSNATLAQHKKLIDYLQLK---------------------V 1258
                 ...|||...:|.::     |.|..:.:|:|.::.:|.:                     :
  Rat  1023 NTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDI 1087

  Fly  1259 EDLSAKKKKTLADKLFGSSHTNKENVSPNDVESSI---LYRALKEELKREQKMNSLLKEQLAQLN 1320
            |.|.| |...|:|....:|..:.:....|..||.|   |....:..:||..     .|:|...: 
  Rat  1088 EQLRA-KLLDLSDSTSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYG-----WKKQYVVV- 1145

  Fly  1321 GTATLRSPRKSAAVNGDSDAPKQRPVSIAALPR----SPQKQQQPLKRTTSQV------------ 1369
                  |.:|....|.:.|..:..|..:..:.:    .|..|....:..|.::            
  Rat  1146 ------SSKKMLFYNDEQDKEQSSPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEG 1204

  Fly  1370 ELKTTAE-KPT----KVTIENQAHHRFELALQESKVDAVNCVVCEKAVVAGSPFW---------K 1420
            |.:...| :|.    |...:|...|.|...|...   ..||..|.|      |.|         :
  Rat  1205 ECRKDIEVEPVQQGEKTNFQNHKGHEFIPTLYHF---PANCEACAK------PLWHVFKPPPALE 1260

  Fly  1421 CKECKDVTHRKCRSNVQSHCGSTKPTAPSADDLSSIQSVSSLTLDSVDVAGGTTSGGEYIGSLVY 1485
            |:.|    |.||.   :.|       ....:||.|...||                        |
  Rat  1261 CRRC----HVKCH---RDH-------LDKKEDLISPCKVS------------------------Y 1287

  Fly  1486 SSDGAEDQARKEIEVNCAFEVAEQQILLLGCNTGLYAYHLDSQR--LVHISGLESVSCMSICKRL 1548
            ....|.|                  :|||.|:.       |.|:  :.|           :.|::
  Rat  1288 DVTSARD------------------MLLLACSQ-------DEQKKWVTH-----------LVKKI 1316

  Fly  1549 AKAIMVGTVGEKLYQCDYRQLESRCQSSSSCHKPVLETS 1587
            .|....|.|     :...|.|.:|..::.|..|.|..||
  Rat  1317 PKNPPSGFV-----RASPRTLSTRSTANQSFRKVVKNTS 1350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 143/358 (40%)
S_TKc 113..383 CDD:214567 118/276 (43%)
Smc 487..1222 CDD:224117 162/784 (21%)
CNH 1503..1774 CDD:279162 19/87 (22%)
Rock1NP_001376168.1 STKc_ROCK1 2..406 CDD:270772 158/400 (40%)
Interaction with FHOD1. /evidence=ECO:0000250 368..727 102/543 (19%)
SMC_prok_B 426..>1097 CDD:274008 180/888 (20%)
HR1_ROCK1 489..554 CDD:212029 17/99 (17%)
SHROOM3 binding. /evidence=ECO:0000250|UniProtKB:Q13464 707..946 59/263 (22%)
ROCK_SBD 836..913 CDD:409019 19/76 (25%)
RHOA binding. /evidence=ECO:0000250 998..1010 4/11 (36%)
PH_ROCK 1119..1225 CDD:269948 19/117 (16%)
C1_ROCK1 1222..1290 CDD:410424 22/114 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.