DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and AT2G20470

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_001318254.1 Gene:AT2G20470 / 816567 AraportID:AT2G20470 Length:569 Species:Arabidopsis thaliana


Alignment Length:566 Identity:169/566 - (29%)
Similarity:264/566 - (46%) Gaps:134/566 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KGAGVCAKPAGSASGSGIPASTRRSIVPV------STTSAAVAEA-------------ICREGLL 67
            |||      :|.|.|.|...|.....|..      :||...||.|             |.:|...
plant    20 KGA------SGGAGGGGSNGSADEHNVETDEEAVSNTTKQKVAAAKQYIENHYKEQMKILQERKE 78

  Fly    68 DAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLR-----VNADDFLIKTLIGQGYFGNV 127
            ....|.....|.|..::...|:.:|:.|     :||..:|     :...||.:.|:||:|.||.|
plant    79 RRSMLEQKLADADVSEEDQNNLLKFLEK-----KETEYMRLQRHKLGVADFDLLTMIGKGAFGEV 138

  Fly   128 HLVVERQTNDIYAMKKIKKSVV----TTSQVKEERDIMSIRNSEWLINLQYAFQDNDNLYLVMEY 188
            .:..|:.|..:|||||:||:.:    ....|:.||::::..:|.:::.|..:|||:|:|||||||
plant   139 RVCREKTTGQVYAMKKLKKAEMLRRGQVEHVRAERNLLAEVDSNYIVKLYCSFQDDDHLYLVMEY 203

  Fly   189 MPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGN 253
            :||||:::|:.|.....|:.|:||:||..:|:.::|...|:||||||:|:|:||:||::|:|||.
plant   204 LPGGDMMTLLMRKDTLTEEEAKFYVAETVLAIESIHRHNYIHRDIKPDNLLLDRYGHLRLSDFGL 268

  Fly   254 AAALD--------------------------------------RDGHVLSLSPVGTPDYIAPELL 280
            ...||                                      |:...|:.|.||||||||||:|
plant   269 CKPLDCSAIGENDFSNNSNGSTEQEAGSTAPKRTQQEQLEHWQRNRRTLAYSTVGTPDYIAPEVL 333

  Fly   281 QTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSHCEESHLKELI 345
                   |.|...     :.||:||:|.|.||::....||:.|:...|..||::.  :||||   
plant   334 -------LKKGYG-----MECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNW--KSHLK--- 381

  Fly   346 SFPADLKVSVNYRNLIESLVTNPSKRL---SYERIKNHPFFSEIPWGSIRSQVPPIIPTVRSDDD 407
             ||.:..:|...::||.||:.:..:||   ..:.:|.|.:|..:.|.:|.......:|.|..|.|
plant   382 -FPEEAILSREAKDLINSLLCSVRRRLGSKGADELKAHTWFETVDWDTIFDMDAAFVPEVNDDLD 445

  Fly   408 TSNFE--DGIRHKTRREQGVAKKSLTTNMKSNDF----SGKDLPFIGYSFVHMEKSAISATTDEK 466
            |.|||  |....:|:           |:.||..:    |.||:.|:||::.:.|      ..::.
plant   446 TQNFEKFDESESETQ-----------TSSKSGPWRKMLSSKDINFVGYTYKNFE------IVNDY 493

  Fly   467 LQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRKTDNKSQVVADA 512
            ....:.||.:|.|:....:..|             .||.|...:|:
plant   494 QVPGMAELKKKKKSTRPMVKSL-------------FDNGSSETSDS 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 134/391 (34%)
S_TKc 113..383 CDD:214567 111/314 (35%)
Smc 487..1222 CDD:224117 5/26 (19%)
CNH 1503..1774 CDD:279162
AT2G20470NP_001318254.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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