DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and cdc42bpaa

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_021322967.1 Gene:cdc42bpaa / 567912 ZFINID:ZDB-GENE-120727-12 Length:1757 Species:Danio rerio


Alignment Length:2003 Identity:471/2003 - (23%)
Similarity:766/2003 - (38%) Gaps:623/2003 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EGLLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLIKTLIGQGYFGNVH 128
            |.|||....:|:||....| :|::|:|||:...:|...:.:::|::.:||.|..:||:|.||.|.
Zfish    29 ESLLDVLICIYDECTNSPL-RREKNVAEFLEWAKPFTSKVKQMRLHKEDFEILKVIGRGAFGEVA 92

  Fly   129 LVVERQTNDIYAMKKIKK----SVVTTSQVKEERDIMSIRNSEWLINLQYAFQDNDNLYLVMEYM 189
            :|..:.::.::|||.:.|    ....|:..:||||::...:|:|:..|.|||||::.|||||:|.
Zfish    93 VVKVKSSDKVFAMKILNKWEMLKRAETACFREERDVLVNGDSQWITTLHYAFQDDNFLYLVMDYY 157

  Fly   190 PGGDLLSLMSR-HGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGN 253
            .|||||:|:|: .....||:|||||||:.:|:.::|::.||||||||:|||||..|||:|||||:
Zfish   158 VGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLHYVHRDIKPDNILIDVNGHIRLADFGS 222

  Fly   254 AAALDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETT 318
            ...|..||.|.|...|||||||:||:||.:...|....       ..||:||:|:..||::...|
Zfish   223 CLKLTEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYG-------PECDWWSLGVCMYEMLYGET 280

  Fly   319 PFHEDNVHETYSKILSHCEESHLKELISFPADL-KVSVNYRNLIESLVTNPSKRL---SYERIKN 379
            ||:.:::.|||.||::|      ||...|||.: .||.|.::||..|:.....||   ..|..|.
Zfish   281 PFYAESLVETYGKIMNH------KERFQFPAQMTDVSENAKDLIRRLICCREHRLGQNGIEDFKQ 339

  Fly   380 HPFFSEIPWGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSND-FSGKD 443
            |||||.|.|.:||:...|.||.|.|..|||||:        .:....|.:.|....|:. |||..
Zfish   340 HPFFSGIDWQNIRNCDAPYIPEVSSPSDTSNFD--------VDDDCLKNTETMPPPSHTAFSGHH 396

  Fly   444 LPFIGYSFVH---------MEKSAISATTDEKLQEKLKELL---------QKLKTRENEISMLKQ 490
            |||:|:::..         :.:||..|..|..:|..|::.|         ::|:..:.|:....|
Zfish   397 LPFVGFTYTSNCTLSDRGCLRESAAPAQMDVCVQRGLEDSLATEAYERRIRRLEQEKLELGRKLQ 461

  Fly   491 DLLRAQQSLRKTDNKSQVVADAKMEIKKLQ---QIIKEKTMELTTCKTQIKTLQSSAKIDEEMWS 552
            :..:|.|:|:.:.:...|.::.:.||:.|:   :::|::..:....:.|::. ..||:.|.|..|
Zfish   462 ESTKAVQALQYSSSDGPVSSNREFEIRGLKEEIEMLKKQIADTGQVEQQLEQ-AISARSDMEDSS 525

  Fly   553 KKEATITDLLRLNRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEECKHLSM 617
            |:..::...|:..:|:.::.:             |:.:.:|..||:..:||:     |......|
Zfish   526 KQIRSLEKQLKSTKQERDDLQ-------------KRLQESSDKQKVQGKELK-----EADSQRKM 572

  Fly   618 KLQNYKDMLQQIKE-QNLKSE-TNHEEQRRQMAELYEQKLTDLRKKVRDSQDTNRRMTMEIKEIR 680
            .:|.:.::.:::.| ::||.. |.....:.:..:...||:..||..||.::...:.|.::.:|..
Zfish   573 AMQEFAEVSEKVTELRSLKQRLTRQLRDKEEELDSLNQKVEALRLDVRKAERAKKEMEVQAEEWS 637

  Fly   681 TELDESISSSKSTQEAKNATERNIEEILRRLNEEIAS-------------NNELHAEKVKLETKL 732
            .|          .|:.|...||: |:..|:|.||:.|             ::|.:.|..||...|
Zfish   638 AE----------AQKEKKLRERS-EQFSRQLEEELDSIKQKHVGRSPSTGSSEQNQELSKLRADL 691

  Fly   733 QLKENETQEVRAECHRLERELQLAECRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLLA 797
               |.:|...:.|..|:|::                           ...||.:::.:|      
Zfish   692 ---EKKTVHFKEELSRIEQQ---------------------------HANELKSLKKEL------ 720

  Fly   798 AKESENHQKGRADQLQTLVTKLEQMLERFNEQSLSPTKSHSSRKQ-EGETVGDMLERQNEKLE-- 859
             ||||..|.....::..|..||::          |..:|||.|.: |.|.|  :|..:|:||.  
Zfish   721 -KESEGQQLSLKKEIMMLKDKLDK----------SRRESHSERDELEFERV--LLSEENKKLSSE 772

  Fly   860 -DKLAAVREQMIVERQAARTANLSLWKVEKQLEEALSEKKLLARRMELTEDRIKKVQNASDEAQR 923
             |||:.                     ..|||||.:                            |
Zfish   773 LDKLSC---------------------SNKQLEEKI----------------------------R 788

  Fly   924 MLKTSQEETRQRESRIEELKQELAAAKRDVLKEHRQWEKAEQERMKCKSEIIEHLANVHRLEQQE 988
            :|...:|.....|::|.|:.|.::..     |:.|.:.:|...:|   :|.:|.|.|. .|..:.
Zfish   789 VLADEKESVAHWEAQITEIIQWVSDE-----KDARGYLQALATKM---TEELEGLKNA-SLGARA 844

  Fly   989 TELRQKLRQIQSRFDGVTLEQKNTIRELQEEREKSRKANDSCLVLQKELKQLTDNFQRLKYACSI 1053
            |::..|:|::........||                        ||..|                
Zfish   845 TDMPWKVRRLAKLDMSARLE------------------------LQSAL---------------- 869

  Fly  1054 TDSQLTEVETMLKSEQERNKSQKSQLDTLHEKLRERNDQLTDLRKQLTTVESEKRLAEQRAQVLA 1118
             |:::...:|:   :.|.||.:.|.:.| ..||.|...|..||:.::              |.|.
Zfish   870 -DAEIKAKQTI---QDELNKVKASHMAT-ECKLEESEKQNQDLQAEI--------------QRLK 915

  Fly  1119 SEIDELRLNLKEQQKKLVAQQDQLVEQTNALFATQERAELLDGQNANYEAQTADSNREMVSLKEE 1183
            .|.|.||::      |.|..||   .|.:.|.........||    .::..||            
Zfish   916 QETDNLRMS------KGVKHQD---SQNSFLAFLNAPTSALD----QFDRSTA------------ 955

  Fly  1184 NARILSELFHKKEEVGNLQAEIRGLESAQANLHAEID-----SLQDTLAEKEQFYVQRDIKSNAT 1243
                                      |..|.....||     ||.:|.:.:|      |.:|.||
Zfish   956 --------------------------SGPAGKGRRIDSIDNFSLSNTPSREE------DGRSQAT 988

  Fly  1244 LAQHKKLIDYLQLKVEDLSAKKKKTLADKLFGSSHTNKENVSPNDVESSILYRALKEELKREQ-- 1306
                                             ||:...:.: :||||       .|:.|..|  
Zfish   989 ---------------------------------SHSRSPSTT-SDVES-------HEQPKAHQFV 1012

  Fly  1307 --------KMNSLLKEQLAQLNGTATLRSPRKSAAVNGDSDAPKQRPVSIAALPRSPQKQQQPLK 1363
                    |.|......:..:....|......|..|.....||       |..|..|.:.:.|| 
Zfish  1013 VKTFNTPTKCNQCTSLMVGIIRQGCTCEVCNFSCHVTCADKAP-------AVCPIPPDQTKGPL- 1069

  Fly  1364 RTTSQVELKTTAEKPTKVTIENQAHHRFELALQESKVDAVNCVVCE-KAVVAGSPFWKCKE---- 1423
            ....|..:.|..|...||.........::.|:         .|||: |..:...|..|..:    
Zfish  1070 GIDPQKGIGTAYEGHVKVPKPLGVKKGWQRAI---------AVVCDFKLFLYDLPEGKAAQPGVV 1125

  Fly  1424 ------------------CKDVTH--RK---C--RSNVQSHCGSTKPTAPSADDLSSIQSVSSLT 1463
                              ..||.|  ||   |  |......|.            ||.:..|.|.
Zfish  1126 VNQVIDMRDEEFSVSPVLASDVIHANRKDIPCIFRVTASQLCA------------SSNKKCSILI 1178

  Fly  1464 LDSVDVAGGTTSGGEYIGSL----------------VYSSDGAEDQARKEIEVNCAFEVAEQQIL 1512
            |     |.......:::|.|                ||....|.|.|...|:...:..:.:.:.:
Zfish  1179 L-----ADSDQERTKWVGLLKELHRLLKKSKLKERFVYVPKEAYDCALPLIKTTQSAAIIDHERI 1238

  Fly  1513 LLGCNTGLYAYHLDSQRLVHISGLESVSCMSI--CKRLAKAIMVGTVGE-KLY---QCDYRQLES 1571
            .||...|||..|:....::.:...:.|..:.:  .::|. |::.|..|. :||   ..|.|.:||
Zfish  1239 ALGNEEGLYVIHVTKDEIIKVGDNKKVHQIELIPSEQLI-AVISGRNGHVRLYPMTALDDRDVES 1302

  Fly  1572 RCQSSSSCHKPVLETSAIELPFANRTPSEKWKLVLISDEAENALDSVAIAATSTRIVILKYDLKL 1636
                    :| :.||...:              .|:|....:...:....|......::.|:|..
Zfish  1303 --------YK-IAETKGCQ--------------TLLSGTIRHGSLTCLFVAMKKPDKVIVYELNK 1344

  Fly  1637 HMFKPVRALDTATPVTSIF---------------FTRH--------SAIVSSDK----FYE-IDL 1673
            ...:..:..:...|.:..:               |.|:        |:::..|.    |.| :.|
Zfish  1345 SKARHRKLREILVPGSVQWMGLQGEKLCVGFQSGFLRYSLQGDGGTSSLLHPDDHTLGFIEQLGL 1409

  Fly  1674 DNYAAEEFVDLSDKSMESTAKCQPLTAVRISRQEYLLCFAEYGVFVDEFGCRSRPYDLNWVYAPT 1738
            |:                      |.||.||.:|.||||:..|::||..|.|||..:|.|...||
Zfish  1410 DS----------------------LCAVEISSKELLLCFSSIGIYVDYQGRRSRQQELMWPATPT 1452

  Fly  1739 GFVYRDPFLFI--------------SHYQSVQIVRLHR------------------SFSKEMASG 1771
            ...|..|:|.:              ...|::.:.::|.                  .|..:.|.|
Zfish  1453 ACRYNAPYLSVYSENAVDVFDVNTMEWIQTIPLKKVHPLNSDGSLNLLGLETVRLIYFKNKTAEG 1517

  Fly  1772 D-----NASENSES----------------PELQRVYL-------PHYMSTLLANSGDVNLYAVA 1808
            |     ..|:||..                ||.:||..       |...:.|::|..:.|     
Zfish  1518 DELVVPETSDNSRKQMVRSTASKRRFSFRIPEEERVLQRREMLRDPEIRNKLISNPTNFN----- 1577

  Fly  1809 IDQRPCNGTQKIYHL---DTMQAFKQKFNISMETLSSVATSVTLGSTVTGNSI 1858
                      .:.|:   |.:|..|:   :.|...|..:..| ||::|:..||
Zfish  1578 ----------HVVHMGPGDGIQILKE---LPMNMRSQESRGV-LGASVSIPSI 1616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 149/350 (43%)
S_TKc 113..383 CDD:214567 121/278 (44%)
Smc 487..1222 CDD:224117 148/761 (19%)
CNH 1503..1774 CDD:279162 64/341 (19%)
cdc42bpaaXP_021322967.1 PKc_like 4..412 CDD:328722 164/404 (41%)
SbcC <433..>926 CDD:223496 138/694 (20%)
KELK 528..606 CDD:318090 15/95 (16%)
C1_1 1009..1059 CDD:278556 9/56 (16%)
PH_MRCK 1068..1203 CDD:269949 30/161 (19%)
CNH 1229..1495 CDD:307087 60/311 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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