DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and Sbf

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_477401.2 Gene:Sbf / 41427 FlyBaseID:FBgn0025802 Length:1993 Species:Drosophila melanogaster


Alignment Length:1850 Identity:322/1850 - (17%)
Similarity:583/1850 - (31%) Gaps:626/1850 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 IKKSVVTTSQVKEERDIMSIRNSEW--------LINLQYAFQDNDNLYLVMEYMPGGDLLS---- 196
            ||..::....|..|..|:.:....|        |:.|.|.|: ..::|:.:...|..::||    
  Fly   235 IKNVLILLCSVMTENKILFLSKCYWHLTDSCRALVALMYPFR-YTHVYIPILPAPLTEVLSTPTP 298

  Fly   197 -LMSRHGPFD---EDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGNAAAL 257
             :|..|....   .||....:.:|...|.|:.|.......|.|..:.......:.:..|.|.|..
  Fly   299 FIMGIHSSLQTEITDLLDVIVVDLDGGLVTIPESLTPPVPILPSPLWEQTQDLLSMILFPNLAQA 363

  Fly   258 DRDGHVLSLSPVGTPDYIA-------PEL--------LQTISTYKLSKSMHDVSRIVSCDYWSMG 307
            |     |:...:..|..||       .||        .|.:..|:...::..:.......:...|
  Fly   364 D-----LAFPTLERPSAIAKTDAQIDKELRAIFMRLFAQLLQGYRSCLTIIRIHPKPVITFHKAG 423

  Fly   308 IIGYELICE-------------TTPFHE-----------DNVHETYSKILSHCEESHLKELI--- 345
            .:|...:.|             ||..:|           |.::.:.:::|.  .|:..:.|:   
  Fly   424 FLGARDLIESEFLFRVLDSMFFTTFVNERGPPWRSSDAWDELYSSMNELLK--SEAQNRNLVGRT 486

  Fly   346 ---------SFPADLKVSVNYRNLIESLVTNPS--KRLSYERIKNHPFFSEIPWGSIRSQVPPII 399
                     :||:..::..:.:.|...|..|..  ..:||.:....|     |.|:.:....|..
  Fly   487 QRFKGYFNFTFPSYFQILTHIQELGRVLYENEGTLAHISYAQKVLRP-----PEGAFQRIHQPAF 546

  Fly   400 PTVRSDDDTSNFEDGIRHKTRREQGVAKK-SLTTNMKSNDFSGKDLPFIGYSFVHMEKSAISATT 463
            |.:.|:......::||     |:.||.:: .:|.|.......|..||           .|:....
  Fly   547 PRISSEKVELIIQEGI-----RKNGVPQRFHVTRNQHRIIPMGPRLP-----------EALDVRP 595

  Fly   464 DEKLQEKLKELLQKLKTR--ENEISMLKQDLLRAQQSLRKTDNKSQVVADAKMEIKKLQQIIKEK 526
            :.:...:..|:|:...:.  ||.|:..::.|....::|...|.:..:..:....:...:.::..:
  Fly   596 NVQNSARRLEVLRICVSYIFENRITDARKLLPAVMRTLMHRDARLILCREFFGYVHGNKAVLDHQ 660

  Fly   527 TMELTTCKTQIKTLQSSAKIDE-----------EMWSKKEAT------ITDLLRLNRQKYEEAKI 574
            ..||.. :...|.||.|:.|||           .::.:|.:|      .|::       .:.|..
  Fly   661 QFELVV-RFMNKALQKSSGIDEYTVAAALLPMSTIFCRKLSTGVVQFAYTEI-------QDHAIW 717

  Fly   575 ASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEECKHLSMKLQNYKDMLQQIKEQNLKSETN 639
            .:.|.:|.......|.....|..|..|:.| :.|...|....:.|:. ...|:...||..||...
  Fly   718 KNLQFWESTFFQDVQGQIKALYLLHRRQNE-HQKEANCVLDEVPLEE-PTALEITAEQLRKSPNI 780

  Fly   640 HEEQRRQMAE-----LYEQKLTDLRKKVRDSQDTNRRMTMEI-------------KEIRTELDES 686
            .||::.::|:     ||.|.:          ...||.:::.|             ...|.|.::|
  Fly   781 EEEKKAELAKSEESTLYSQAI----------HFANRMVSLLIPLDVNVDAASKPKPAFRLEENQS 835

  Fly   687 ISSS---------KSTQ--EAKNATERNI--------------------EEILRRLNEEIASNNE 720
            :|:|         .|.:  |..||.|..:                    .|.:|.|::.:.....
  Fly   836 VSNSIMGSHSLSEHSDEGFEENNALEIGVTVGKTISRFIDCVCTEGGVTSEHIRNLHDMVPGVVH 900

  Fly   721 LHAEKVKLETKLQLKENETQEVRAECHRLERELQLAECRCQLAESSLATQVSPYETAPGSLTELN 785
            :|.|.:         |....|.:...|..:.::|..   |.|....|.|                
  Fly   901 MHIESL---------EPVYLEAKRHPHVQKPKIQTP---CLLPGEDLVT---------------- 937

  Fly   786 AIEDQLRADLLAAKESENHQKGRADQLQTLV--------TKLEQMLE------RFNEQSLSPTKS 836
               |.||..|:        ..||.|:.|.|:        |....:.:      .|.||.:..|..
  Fly   938 ---DHLRCFLM--------PDGREDETQCLIPAEGALFLTNYRVIFKGSPCDPLFCEQVIVRTFP 991

  Fly   837 HSSRKQEGETVGDMLERQNEKLEDKLAAVREQMIVERQAARTANLSLWKV----EKQLEEALSEK 897
            .:|..:|            :|:.....|..:|.:.|....|:::..|.||    |...|:..|.:
  Fly   992 IASLLKE------------KKISVLYLAHLDQTLTEGLQLRSSSFQLIKVAFDPEVTPEQIESFR 1044

  Fly   898 KLLARRMELTEDRIKKVQNASDEAQ--------RMLK-TSQEETRQRESRIEELKQELAAAKRDV 953
            |:|:           |.::..||.:        .||: .:..:|:::.|.::      ..||:.:
  Fly  1045 KILS-----------KARHPFDEFEYFAFQSYGTMLQGVAPLKTKEKYSTLK------GFAKKTL 1092

  Fly   954 LKEHRQ--WEKAEQERMKCKSEIIEHLANVHRLEQQETELRQKLRQIQSRFDGVTLEQKN----- 1011
            |:..::  :::.:|.:.|..|:.....|:....:..:.||.          ||...|.:|     
  Fly  1093 LRGAKKAGFKQKQQTKRKLVSDYDYGSADAQETQSIDDELE----------DGDEFETQNNAMPR 1147

  Fly  1012 --TIRELQEEREKS--------------------------------------------------- 1023
              |.::::..||:|                                                   
  Fly  1148 LLTTKDVERMRERSYVQDWKRLGFDAESQRGFRISNANTSYATCRSYPAIIVAPVQCSDAAIMHL 1212

  Fly  1024 --------------RKANDSCLVLQKE---------LKQLTDNFQRLKYACSITDSQ----LTEV 1061
                          |.||.:.|:...:         ||..|.:.....:..:....|    |..:
  Fly  1213 GRCFKGQRIPLPTWRHANGALLIRGGQPNSKSVIGMLKNTTGSTTNAHHDVTHYPEQDKYFLALI 1277

  Fly  1062 ETMLK-----------------------SEQER-------NKSQKSQLD--------------TL 1082
            .||.|                       |..:|       ::..|:.||              |:
  Fly  1278 NTMPKLTPLALNQYSGMNLSMSSLMGHSSSDDRQPLTPELSRKHKNNLDISDGNKSSQGGKGGTM 1342

  Fly  1083 HEKLRERNDQLTDLRKQLTTVESEKRLAEQR------AQVLASEIDELRLNLKEQQK-------- 1133
              |...:|......||.......||..|:..      |..:..:..::|.:....:|        
  Fly  1343 --KGNPKNSLAHPFRKMRLYALGEKSQAKSNMNVDFCADFIPVDYPDIRQSRPAFKKLIRACMPS 1405

  Fly  1134 ------------KLVAQQDQLVEQTNALFATQERAELLDGQNANYEAQTADSNREMVSLKE---- 1182
                        |:|.|.|.|.:.::.:..:....:|:|.|.::......|.:.....|..    
  Fly  1406 HNTNEADGQSFAKMVEQSDWLQQISSLMQLSGAVVDLIDLQESSVMLSLEDGSDVTAQLSSIAQL 1470

  Fly  1183 ---------ENARILSELFHKKE--EVGNLQAEIRGLESAQANLHAE-----------IDSLQDT 1225
                     :..|:|.|    ||  ..|:..|....|:.:.||.:..           :..||..
  Fly  1471 CLDPYYRSLDGFRVLVE----KEWLAFGHRFAHRSNLKPSHANTNIAFAPTFLQFLDVVHQLQRQ 1531

  Fly  1226 LA---EKEQFYVQRDIKSNATLAQHKKLIDYLQLKVED-----LSAKKKKTLADKLFGSS--HTN 1280
            ..   |...||: |.:..::...:.:..:...:|:..|     :..|:....|..:||:.  .||
  Fly  1532 FPMAFEFNDFYL-RFLAYHSVSCRFRTFLFDCELERSDSGIAAMEDKRGSLNAKHMFGAGGMATN 1595

  Fly  1281 KE----NVSPNDVES-------SILYRALKEELKREQKMNSLLKEQLAQLNGTATLRSPRKSAAV 1334
            ..    :|.|.|:.|       :.:..::.:.::|:.....:....|...:.:.|||.....||:
  Fly  1596 GSDDECSVYPLDIRSQRAPAPLNRIGHSIFDYIERQHNKTPIFYNFLYSGDKSVTLRPQNNVAAL 1660

  Fly  1335 N-----------------------------------------GDSDAPKQRPVSIAAL------- 1351
            :                                         |..:..|..|.:...|       
  Fly  1661 DLWCYYTNEELAQGAPYDLEVTTVDDEIDLSETKGKRMVITAGYDNMEKCNPSAYVCLLSEVKQA 1725

  Fly  1352 ----PRSPQK-----------QQQPLKRTTS--QVELKTTAEKPTKVTI----------ENQAH- 1388
                ...|||           |.:|:.|.||  .:.::|...|.:.:.|          :...| 
  Fly  1726 ETERGHLPQKWLQVWNSLEVPQLEPVARNTSLGNIFVQTHQHKRSTLEIIMKGRLAGYQDKYFHP 1790

  Fly  1389 HRFELALQESKVDAVNCVVCEKAVVAGSPFWKCKECKDVTHRKCRSNVQSHC-------GSTKP- 1445
            ||||   :.......||..|.| ::.|...::|.:|.:..|.||..:...:|       |:..| 
  Fly  1791 HRFE---KHPYTTPTNCNHCTK-LLWGPVGYRCMDCGNSYHEKCTEHSMKNCTKYKAIDGAVGPP 1851

  Fly  1446 -TAPSADDLSSIQSVSSLTLD----------SVDVAGGTTSGGEYI--GSL---------VYSS- 1487
             ...|..|.:||.|.::.|..          |.:||...|..|...  |:|         |..| 
  Fly  1852 NVNMSQGDTASIASSAATTARTSSHHFYNQFSSNVAENRTHEGHLYKRGALLKGWKQRWFVLDSI 1916

  Fly  1488 -------DGAEDQARKEIEVNCAFEVAEQQ 1510
                   |.:||.|.|.|     .|:||.|
  Fly  1917 KHQLRYYDTSEDTAPKGI-----IELAEVQ 1941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 69/377 (18%)
S_TKc 113..383 CDD:214567 54/307 (18%)
Smc 487..1222 CDD:224117 164/1010 (16%)
CNH 1503..1774 CDD:279162 3/7 (43%)
SbfNP_477401.2 uDENN 1..91 CDD:214824
DENN 142..325 CDD:280329 19/90 (21%)
dDENN 384..452 CDD:129037 9/67 (13%)
SBF2 585..807 CDD:289132 46/252 (18%)
PH-GRAM_MTMR5_MTMR13 933..1047 CDD:275396 30/152 (20%)
Myotub-related 1161..1565 CDD:284109 55/410 (13%)
C1 1791..1838 CDD:237996 14/50 (28%)
PH_Sbf1_hMTMR5 1888..1993 CDD:269941 15/58 (26%)
PH 1891..1992 CDD:278594 15/55 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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