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Protein Alignment sti and trc

DIOPT Version :9

Sequence 1:	NP_001261768.1	Gene:	sti / 39429	FlyBaseID:	FBgn0002466	Length:	1858	Species:	Drosophila melanogaster
Sequence 2:	NP_001262071.1	Gene:	trc / 40165	FlyBaseID:	FBgn0003744	Length:	463	Species:	Drosophila melanogaster

Alignment Length:	403	Identity:	127/403 - (31%)
Similarity:	210/403 - (52%)	Gaps:	79/403 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   104 RKLRVNADDFLIKTLIGQGYFGNVHLVVERQTNDIYAMKKIKKSVV----TTSQVKEERDIMSIR 164
            ::||:..:||....:||:|.||.|.||.::.|..:||||.::|:.:    ..:.|:.|||::...
  Fly    84 KRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEA 148

  Fly   165 NSEWLINLQYAFQDNDNLYLVMEYMPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYV 229
            :.:|::.:.|:|||..||||:||::||||:::|:.:.....|:..:||::|..:|:.::|::|::
  Fly   149 DHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYISETALAIDSIHKLGFI 213

  Fly   230 HRDIKPENILIDRFGHIKLADFG-----------------------------------------N 253
            ||||||:|:|:|..||:||:|||                                         .
  Fly   214 HRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHRTDFYRDLSQAKPSDFIGTCASLSCSPMDSKRR 278

  Fly   254 AAALDRDGHVLSLSPVGTPDYIAPEL-LQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICET 317
            |.:..|:...|:.|.||||||||||: |||             ....:||:||:|:|.||::...
  Fly   279 AESWKRNRRALAYSTVGTPDYIAPEVFLQT-------------GYGPACDWWSLGVIMYEMLMGY 330

  Fly   318 TPFHEDNVHETYSKILSHCEESHLKELISFPADLKVSVNYRNLIESLVTNPSKRLSYER----IK 378
            .||..||..:||.|::      :.:|.:.||.::.:|...:..|.:......:||..:|    :|
  Fly   331 PPFCSDNPQDTYRKVM------NWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLK 389

  Fly   379 NHPFFSEIPWGSIRSQVPPIIPT-VRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSNDFSGK 442
            :.|||..:.|..||.: |..||. |||.||||||::        ...|:.:..:..:.......|
  Fly   390 SVPFFRGVDWEHIRER-PAAIPVEVRSIDDTSNFDE--------FPDVSLEIPSAPIPQGGEIAK 445

  Fly   443 DLPFIGYSFVHME 455
            |..||.|::...|
  Fly   446 DWVFINYTYKRFE 458

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.