DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and sax-1

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_508627.5 Gene:sax-1 / 180655 WormBaseID:WBGene00004727 Length:476 Species:Caenorhabditis elegans


Alignment Length:501 Identity:148/501 - (29%)
Similarity:233/501 - (46%) Gaps:128/501 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 KRDRNIAEFVNKFRPI-------------IEETRKL--------------RVNADDFLIKTLIGQ 121
            ||....||..|:.:.:             .||.||:              |:..:||....:||:
 Worm    31 KRVTQCAERENRLKKLEEDISARGLSDEEKEEKRKIHHSKETDYLRLKRTRLTVNDFESLKVIGR 95

  Fly   122 GYFGNVHLVVERQTNDIYAMKKIKKSVVT----TSQVKEERDIMSIRNSEWLINLQYAFQDNDNL 182
            |.||.|.||.:..|..|||||.::||.:.    |:.|:.||||:|..:.:|::.:.|:|||..||
 Worm    96 GAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAHVRAERDILSEADCDWVVKMYYSFQDYSNL 160

  Fly   183 YLVMEYMPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIK 247
            |||||::||||:::|:.:.....|:..:||:||..:|:..:|.:|::||||||:|:|:|..||:|
 Worm   161 YLVMEFLPGGDMMTLLIKKDTLTEEATQFYIAEAALAIQFIHSLGFIHRDIKPDNLLLDARGHVK 225

  Fly   248 LADFG----------------------------------NAAALDRDGHVLSLSPVGTPDYIAPE 278
            |:|||                                  .|....|:....:.|.||||||||||
 Worm   226 LSDFGLCTGLKKFHRTDHYRNWPSTLPPDFISKPFESKRKAETWKRNRRAYAYSTVGTPDYIAPE 290

  Fly   279 LLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSHCEESHLKE 343
            :.|.....|            |||:||:|:|.||::....||..:...|||.|::      :.::
 Worm   291 VFQPNGYTK------------SCDWWSLGVIMYEMLIGYPPFCSELPQETYRKVI------NWQQ 337

  Fly   344 LISFPADLKVSVNYRNLIESLVTNPSKRL----SYERIKNHPFFSEIPWGSIRSQVPPIIPTVRS 404
            .:.||:|:.:|:..:..|:.......:||    ..:.||..||...|.|..||.:.|||..||:|
 Worm   338 TLVFPSDVPISIEAKATIKRFCCEAERRLGNHGGLDEIKQCPFVKRIDWNHIRERPPPIRVTVKS 402

  Fly   405 DDDTSNFEDGIRHKTRREQGVAKKSLT----TNMKSNDFSGKDLPFIGYSFVHMEKSAISATTDE 465
            .||||||:|           ...:.||    |.::..:..|:...|:.:::              
 Worm   403 IDDTSNFDD-----------FPDEDLTWPTSTLIRPEEQPGRRGEFVDFTY-------------- 442

  Fly   466 KLQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRKTDNKSQVVAD 511
               ::...|.||::         ..||.:.||:.:......|..:|
 Worm   443 ---KRFDGLTQKMR---------YSDLKKFQQAKKNKKGGQQGTSD 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 129/386 (33%)
S_TKc 113..383 CDD:214567 105/311 (34%)
Smc 487..1222 CDD:224117 6/25 (24%)
CNH 1503..1774 CDD:279162
sax-1NP_508627.5 STKc_NDR_like 85..443 CDD:270750 129/403 (32%)
S_TKc 87..381 CDD:214567 105/311 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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