DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and Cdc42bpa

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_038946162.1 Gene:Cdc42bpa / 114116 RGDID:621406 Length:1849 Species:Rattus norvegicus


Alignment Length:1972 Identity:452/1972 - (22%)
Similarity:782/1972 - (39%) Gaps:537/1972 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PASTRRSIVPVSTTSAAVAEAICREGLLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETR 104
            ||.|......|.|             |||....||:||:...| :|::||.|::...:|...:.:
  Rat    18 PAQTNGQCFSVET-------------LLDILICLYDECNNSPL-RREKNILEYLEWAKPFTSKVK 68

  Fly   105 KLRVNADDFLIKTLIGQGYFGNVHLVVERQTNDIYAMKKIKK----SVVTTSQVKEERDIMSIRN 165
            ::|::.:||.|..:||:|.||.|.:|..:..:.::|||.:.|    ....|:..:||||::...:
  Rat    69 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD 133

  Fly   166 SEWLINLQYAFQDNDNLYLVMEYMPGGDLLSLMSR-HGPFDEDLARFYLAELTVALHTLHEMGYV 229
            |:|:..|.|||||::||||||:|..|||||:|:|: .....|::|||||||:.:|:.::|::.||
  Rat   134 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV 198

  Fly   230 HRDIKPENILIDRFGHIKLADFGNAAALDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSMHD 294
            ||||||:|||:|..|||:|||||:...|..||.|.|...|||||||:||:||.:..   .|..:.
  Rat   199 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMED---GKGRYG 260

  Fly   295 VSRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSHCEESHLKELISFPADL-KVSVNYR 358
                ..||:||:|:..||::...|||:.:::.|||.||::|      ||...||..: .||.|.:
  Rat   261 ----PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH------KERFQFPTQVTDVSENAK 315

  Fly   359 NLIESLVTNPSKRL---SYERIKNHPFFSEIPWGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTR 420
            :||..|:.:...||   ..|..|.|||||.|.|.:||:...|.||.|.|..|||||:        
  Rat   316 DLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFD-------- 372

  Fly   421 REQGVAKKSLTTNMKSND-FSGKDLPFIGYSFVHMEKSAISATTDEKLQEKLKELLQKLKTRENE 484
            .:....|.|.|....::. |||..|||:|:::.                                
  Rat   373 VDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYT-------------------------------- 405

  Fly   485 ISMLKQDLLRAQQSLRKTDNKSQVVADAKMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEE 549
                ...:|..:..||.|...:.:..|..::                      :||.::  :..|
  Rat   406 ----SSCVLSDRSCLRVTAGPTSLDLDVNVQ----------------------RTLDNN--LATE 442

  Fly   550 MWSKKEATITDLLRLNRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEECKH 614
            .:.::      :.||.::|.|             |..|.||...|:|.|....::  ......|.
  Rat   443 AYERR------IKRLEQEKLE-------------LTRKLQESTQTVQALQYSTVD--GPLTASKD 486

  Fly   615 LSMKLQNYKDMLQQIKEQNLKSETNHEEQRRQMAELYEQKLTDLRKKVRDSQDTNRRMTMEIKEI 679
            |.:|  :.|:.::::::|  .:|.||.||:.:.|....::|.|..::::..:...:.:..|.:|:
  Rat   487 LEIK--SLKEEIEKLRKQ--VAEVNHLEQQLEEANSVRRELDDAFRQIKAFEKQIKTLQQEREEL 547

  Fly   680 RTELDESI----SSSKSTQEAKNATERNIEEILRRLNEEIASNNELHAEKVKLETKLQLKENETQ 740
            ..||.::.    :.||..::|....:..::|.: .:||.:   .|||.:|.||...::.||.|..
  Rat   548 NKELVQASERLKNQSKELKDAHCQRKLAMQEFM-EINERL---TELHTQKQKLARHVRDKEEEVD 608

  Fly   741 EVRAECHRLERELQLAECRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLLAAKESENHQ 805
            .|..:...|.:||:    |.:.|:..|...           ||  |:..:...|....::||::.
  Rat   609 LVMQKAESLRQELR----RAERAKKELEVH-----------TE--ALIAEASKDRKLREQSEHYS 656

  Fly   806 KGRADQLQTLVTKLEQMLERFNEQSLSPTKSHSSRKQEGETVGDMLERQNE--KLE---DKLAAV 865
            |           :||..||...::.:|.:....|           :|.|.|  ||:   :|.:..
  Rat   657 K-----------QLENELEGLKQKQISYSPGICS-----------IEHQQEITKLKTDLEKKSIF 699

  Fly   866 REQMIVERQAARTANLSLWKVEKQLEEALSEKKLLARRMELTEDRIKKVQNASDEAQRMLKTSQE 930
            .|:.|.:|:....:.:.  .::|:|.::..::..|.:.:.:.:|:::             ||.:|
  Rat   700 YEEEISKREGIHASEIK--NLKKELHDSEGQQLALNKEIMVLKDKLE-------------KTRRE 749

  Fly   931 ETRQRESRIEELKQELAAAKRDVLKEHRQWEKAEQERMKCKSEIIEHLANVHRLEQQETELRQKL 995
            ...:||....|.||:.                 |:|::              .|.::..:|..:|
  Rat   750 SQSEREEFENEFKQQY-----------------EREKV--------------LLTEENKKLTSEL 783

  Fly   996 RQIQSRFDGVTLEQKNTIRELQEEREKSRKANDSCLVLQKELKQLTDNFQRLKYACSITDSQLTE 1060
            .::.|.::.::|..::                     |::|:|.|.|.    |.:.:..::|:||
  Rat   784 DKLTSLYESLSLRNQH---------------------LEEEVKDLADK----KESVAHWEAQITE 823

  Fly  1061 VETMLKSEQERNKSQKSQLDTLHEKLRE-----RNDQL----TDL---RKQLTTVESEKRL---- 1109
            :...:..|    |..:..|..|..|:.|     ||..|    ||:   .::...::...||    
  Rat   824 IIQWVSDE----KDARGYLQALASKMTEELEALRNSSLGTRATDMPWKMRRFAKLDMSARLELQS 884

  Fly  1110 ---AEQRA-QVLASEIDELRLN-------LKEQQKK---LVAQQDQLVEQTNALFATQERAELLD 1160
               ||.|| |.:..|:::::.:       ||:.:||   |:::.:||::.|..| .:::..|..|
  Rat   885 ALDAEIRAKQAIQEELNKVKASNIITECKLKDSEKKNLELLSEIEQLIKDTEEL-RSEKGVEHRD 948

  Fly  1161 GQNA-------------NYEAQTADSNREMVSLKEENARILSELFHKKEEVGNLQAEIRGLESAQ 1212
            .|::             .:|...:.|:..::.       .|.:||..:........:.|..|...
  Rat   949 SQHSFLAFLNTPTDALDQFEDSFSSSSSSLID-------FLDDLFLDRSPSCTPAGKGRRTEPVD 1006

  Fly  1213 ANLHAEIDSLQDTLAEKEQFYVQRDIKSNAT--LAQHKKLIDYLQLKVEDLSAKKKKTLADKLFG 1275
             |.:....|:        :.|:|:...|.:|  .|:..|:.|...|.|...:.:||...|...| 
  Rat  1007 -NTYIRNPSV--------KLYIQQRPTSPSTPSEAEPVKIADSAPLPVHTPTLRKKGCPASAGF- 1061

  Fly  1276 SSHTNKENVSPNDVESSILYRALKEELKREQKMNSLLKEQLAQLNGTATLRSPRKSAAVNGDS-- 1338
                     .|.........::.....|..| ..||:...:.|  |.        |..|.|.|  
  Rat  1062 ---------PPKRKTHQFFVKSFTAPTKCHQ-CTSLMVGLIRQ--GC--------SCEVCGFSCH 1106

  Fly  1339 -----DAPKQRPVSIAALPRSPQKQQQPL-----KRTTSQVELKTTAEKPTKVTIENQAHHR--- 1390
                 .||...||       .|::.:.||     |...:..|......||..|   .:...|   
  Rat  1107 ITCVNKAPTTCPV-------PPEQTKGPLGIDPQKGVGTAYEGHVRIPKPAGV---KKGWQRALA 1161

  Fly  1391 ----FELAL---QESKVDAVNCVVCE-----------KAVVAGSPFWKCKECKDVTH--RK---C 1432
                |:|.|   .|.|....:.|:.:           .:|:|          .||.|  ||   |
  Rat  1162 VVCDFKLFLYDIAEGKASQPSSVISQVIDMRDEEFSVSSVLA----------SDVIHASRKDIPC 1216

  Fly  1433 RSNVQSHCGSTKPTAPSADDLSSIQSVSSLTLDSVDVAGGTTSGGEYIGSL-------------- 1483
            ...|            :|..||:.....|:.:    :|...|...:::|.|              
  Rat  1217 IFRV------------TASQLSAPSDKCSILM----LADSETERSKWVGVLSELHKVLKKNKFRD 1265

  Fly  1484 --VYSSDGAEDQARKEIEVNCAFEVAEQQILLLGCNTGLYAYHLDSQRLVHISGLESVSCMSICK 1546
              ||....|.|.....|:...|..:.:.:.:.||...||:..|:....::.:...:.:..:.:  
  Rat  1266 RSVYVPKEAYDSTLPLIKTTQAAAIIDHERVALGNEEGLFVVHVTKDEIIRVGDNKKIHQIEL-- 1328

  Fly  1547 RLAKAIMVGTVGEKLYQCDYRQLESRCQSSSSCHKPVLETSAI---ELPFANRTPSEKWKLVLIS 1608
             :....:|..:                 |..:.|..:...||:   |..|.....::..:.:...
  Rat  1329 -IPSDQLVAVI-----------------SGRNRHVRLFPMSALDGRETDFYKLAETKGCQTIAAG 1375

  Fly  1609 DEAENALDSVAIAATSTRIVILKYDL-----KLHMFKPVRALDTATPVT---SIFFTRHSAIVSS 1665
            .....||..:.:|   .:..:|.|:|     :...||.::     .|..   ...|:.|..:...
  Rat  1376 KVRHGALSCLCVA---MKRQVLCYELFQSKTRHRKFKEIQ-----VPCNVQWMAIFSEHLCVGFQ 1432

  Fly  1666 DKFYEIDLDNYAAE-EFVDLSDKSMESTAKCQP---LTAVRISRQEYLLCFAEYGVFVDEFGCRS 1726
            ..|....|:...:. ..:..:|.::..... ||   :.||.||.:||||||:..|::.|..|.||
  Rat  1433 SGFLRYPLNGEGSPCNMLHSNDHTLAFITH-QPMDAICAVEISNKEYLLCFSSIGIYTDCQGRRS 1496

  Fly  1727 RPYDLNWVYAPTGFVYRDPFLFISHYQSVQIVRLHRS---------------------------- 1763
            |..:|.|...|:...|..|:|.|....:|.|..::..                            
  Rat  1497 RQQELMWPANPSSCCYNAPYLSIYSENAVDIFDVNSMEWIQTLPLKKVRPLNTEGSLNLLGLETI 1561

  Fly  1764 ----FSKEMASGD-----NASENSES----------------PELQRVYL-------PHYMSTLL 1796
                |..:||.||     ..|:||..                ||.:|:..       |...:.|:
  Rat  1562 RLIYFKNKMAEGDELVVPETSDNSRKQMVRNINNKRRYSFRVPEEERMQQRREMLRDPEMRNKLI 1626

  Fly  1797 ANSGDVNLYAVAIDQRPCNGTQ 1818
            :|..:.|..|   ...|.:|.|
  Rat  1627 SNPTNFNHIA---HMGPGDGIQ 1645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 147/350 (42%)
S_TKc 113..383 CDD:214567 119/278 (43%)
Smc 487..1222 CDD:224117 147/786 (19%)
CNH 1503..1774 CDD:279162 59/322 (18%)
Cdc42bpaXP_038946162.1 STKc_MRCK_alpha 4..412 CDD:270773 167/464 (36%)
SbcC <442..958 CDD:223496 132/659 (20%)
KELK 530..608 CDD:406277 19/81 (23%)
C1 1066..1125 CDD:412127 15/76 (20%)
PH_MRCK 1127..1261 CDD:269949 31/162 (19%)
CNH 1287..1551 CDD:395630 54/292 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22988
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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