DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and rock2

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_004914525.1 Gene:rock2 / 100493965 XenbaseID:XB-GENE-959451 Length:1399 Species:Xenopus tropicalis


Alignment Length:1595 Identity:395/1595 - (24%)
Similarity:666/1595 - (41%) Gaps:424/1595 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EAICR--------EGLLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLI 115
            |||.|        |||||....:..:.|...|:| ::||..|:|::..|:.|.|||::.|:|:.:
 Frog    17 EAILRDPRSPINVEGLLDGLNSIVLDLDFPALRK-NKNIDNFLNRYEKIVREVRKLQMKAEDYDV 80

  Fly   116 KTLIGQGYFGNVHLVVERQTNDIYAMKKIKK-SVVTTSQVK---EERDIMSIRNSEWLINLQYAF 176
            ..:||:|.||.|.||..:.:..:||||.:.| .::..|...   ||||||:..||.|::.|..||
 Frog    81 VKVIGRGAFGEVQLVRHKGSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF 145

  Fly   177 QDNDNLYLVMEYMPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILID 241
            ||..:||:||||||||||::|||.: ...|..|:||.||:.:||:.:|.||.:|||:||:|:|:|
 Frog   146 QDEKHLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALNAIHSMGLIHRDVKPDNMLLD 209

  Fly   242 RFGHIKLADFGNAAALDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSM 306
            ::||:||||||....:|:.|.|...:.|||||||:||:|::        ...|......||:||:
 Frog   210 KYGHLKLADFGTCMKMDQTGMVRCDTAVGTPDYISPEVLKS--------QGGDGYYGRECDWWSV 266

  Fly   307 GIIGYELICETTPFHEDNVHETYSKILSHCEESHLKELISFPADLKVSVNYRNLIESLVTNPSKR 371
            |:..:|::...|||:.|::..|||||:.|      |..::||.|:::||:.:|||.:.:|:...|
 Frog   267 GVFLFEMLVGDTPFYADSLVGTYSKIMDH------KNSLNFPEDVEISVHAKNLICAFLTDREVR 325

  Fly   372 L---SYERIKNHPFF--SEIPWGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLT 431
            |   ..|.||.||||  .:..|.:||..|.|::|.:.||.|||||:|     ...::|.|:    
 Frog   326 LGRNGIEDIKQHPFFKNDQWNWDNIRETVAPVVPELASDIDTSNFDD-----IEDDKGDAE---- 381

  Fly   432 TNMKSNDFSGKDLPFIGYSFVHMEKSAISATTDEKLQEKLKELLQKLKTRENEISMLKQDLLRAQ 496
            |......|:|..|||||:::.                            |||         |...
 Frog   382 TFPNPKAFAGNQLPFIGFTYY----------------------------REN---------LLLS 409

  Fly   497 QSLRKTDNKSQVVADAKMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEEMWSKKEATITDL 561
            :|.|....|:......|.:...||::|.:...:|                ..||.:|.|.     
 Frog   410 ESSRNCKEKNSSAQPMKEQSAHLQKVINKLEEQL----------------HNEMQTKDEL----- 453

  Fly   562 LRLNRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEECKHLSMKLQNYKDML 626
                .||:....:    |.||           |:::||.   |.||:                  
 Frog   454 ----EQKFRAVNL----RLEK-----------TVKELDE---EANAR------------------ 478

  Fly   627 QQIKEQNLKSETNHEEQRRQMAELYEQKLTDLRKKVRDSQDTNRRMTMEIKEIRTELDESISSSK 691
                 ::::|.|...|:.:   .|.:.|.|:.::|..:..|..|.:..|:..::.:|::....::
 Frog   479 -----KSIESTTRQLEREK---ALLQHKSTEYQRKAENDADRKRSLENEVNSLKDQLEDLKRRNQ 535

  Fly   692 STQ---EAKNATERNIEEILRRLNEEIASNNELHAEKVKLETKLQLKENETQEVRAECHRLEREL 753
            ::|   |..|..:|.::|...:|..|  |:......|.:.|...|:::.||.         .|||
 Frog   536 NSQISNEKMNQLQRQLDEANAQLRTE--SDAAARLRKTQTEMSKQIQQLETN---------NREL 589

  Fly   754 QLAECRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLLAAKESENHQKGRADQ----LQT 814
            |...|..:.|:..|               |.:.|      :|.:|.|||...:.:..:    ||.
 Frog   590 QDKTCMLENAKLKL---------------EKDFI------NLQSALESERRDRTQGSEVISDLQG 633

  Fly   815 LVTKLEQMLERFNEQSLSPTKSHSSRKQEGETVGDMLERQNEKLE----DKLAAVREQMIVERQ- 874
            .::.||:.|:: .::.|:..::...:..||..:   ||::...||    .||.|:  |..||:: 
 Frog   634 RISVLEEDLKK-GKELLARAEAEKQQMHEGLAI---LEKEKSNLEIDMTYKLKAL--QQSVEKEE 692

  Fly   875 ------AARTANLSLWKVEKQLEEALS------EKKLLARRMELTEDRIKKVQNASDEAQRMLKT 927
                  .||.|:.:  |:.:.:||..|      ||||...|  |.:.|::.....:::...||..
 Frog   693 AEHKATKARLADKN--KIYQSIEETKSEAMKDMEKKLHEER--LVKQRLENSLLETEKQYSMLDC 753

  Fly   928 SQEETRQRESRIEELKQELA-------------AAKR-----DVLKEHRQWEKAEQERMKCKSEI 974
            ..::.:|:.:.:|.||.:|:             |.||     |:..:.:|....:....:.|.| 
 Frog   754 DLKQAKQKINELESLKDKLSEDVKNLTLKAEQEAQKRNLTHNDLKMQIQQVNSLKMSEKQLKQE- 817

  Fly   975 IEHLANVH-RLEQQETELRQ-------KLRQIQSRFDGVTLEQ------KNTIRELQEEREKSRK 1025
            |.||..:. .||:|..|||:       :::::|   |.:..||      |..:|||:||.|...|
 Frog   818 INHLTEIKLNLEKQNNELRKERVDADGQMKELQ---DQLEAEQYFSTLYKTQVRELKEECEDKSK 879

  Fly  1026 ANDSCLVLQKELKQLTDNFQRL--------------KYACSITDSQLTEV-------ETMLKSEQ 1069
               .|..:|:::::|.|....|              :.|.||.:.|.:::       |..:|...
 Frog   880 ---MCKEVQQKVQELQDERDSLAAQLEITLTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMM 941

  Fly  1070 ERNKSQKSQLDTLHEKLRERNDQLT-----------DLRKQLTTVESEKRLAEQRAQVLASEIDE 1123
            .|:|.:.::.......|.|.|..||           ||..:|                  .|..|
 Frog   942 ARHKQELAEKYATIASLEEANKTLTIDVGNLANEKEDLNNKL------------------KETQE 988

  Fly  1124 LRLNLKEQQKKLVAQQDQ-----LVEQTNALFATQERAELLD-------GQNANYEAQTADSNRE 1176
            |..||||::..::..:.|     |.|:|....|..:.||:::       |.:.:...:..::.:.
 Frog   989 LIQNLKEEESSIITVKAQFEKQLLTERTLKTQAVNKLAEIMNRKLPTKRGPDTDVRRKEKENRKL 1053

  Fly  1177 MVSLKEENARILSELFHKKEEVGNLQAEIRGLESAQANLHAEIDSLQDTLAEKEQFYVQRDIKSN 1241
            .:.||.|..:....:|..:.||.::||.|.....|:..|...:||                  .:
 Frog  1054 QLDLKSEREKFSQLVFKYQREVNDMQALIADENQARVELQMALDS------------------KD 1100

  Fly  1242 ATLAQHKKLIDYLQLKVEDLSAKKKKTLADKLFGSSH--TNKENVSPNDVESSILYRALKEELKR 1304
            :.:.|.:..:..:.|.::..|           .||.|  |:.::..|    .|.|...|...|:.
 Frog  1101 SDIEQLRSQLQSMNLGLDSTS-----------IGSGHGDTDADDGFP----ESRLEGWLSLPLRN 1150

  Fly  1305 EQKMNSLLKEQLAQLNGTATLRSPRKSAAVNGDSDAPKQRPVSIAALPR----SPQKQQQPLKRT 1365
            .:|..         .|....:.|.||....:.:.|.....|..:..:.:    .|..|....:..
 Frog  1151 AKKFG---------WNKKYVVVSSRKILFYDSEQDKELSNPSMVLDIDKLFHVRPVTQTDVYRAD 1206

  Fly  1366 TSQVELKTTAEKPTKVTIENQAHHRFELALQESKVDAV----------------------NCVVC 1408
            ..::      .:..::...|:...:.|   ||.:||.:                      :|..|
 Frog  1207 AKEI------PRIFQILYANEGESKKE---QEFQVDPLEKSNYICHKGHEFIPTLYHFPTSCDAC 1262

  Fly  1409 EKAVVAGSPFW---------KCKECKDVTHRKCRSNVQSHCGSTKPTAPSADDLSSIQSVSSLTL 1464
            .|      |.|         :|:.|    |.||.   :.|....:...........|.:..:|.|
 Frog  1263 MK------PLWHMFKPPAALECRRC----HIKCH---KDHMDKKEEIIAPCKVNYDISTAKNLLL 1314

  Fly  1465 DSVDVAGGTTSGGEYIGSLV----YSSDGAEDQAR 1495
                :|..|....:::..||    .....::.|||
 Frog  1315 ----LANSTEEQQKWVSRLVKKIPKKPPASDHQAR 1345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 144/349 (41%)
S_TKc 113..383 CDD:214567 117/276 (42%)
Smc 487..1222 CDD:224117 177/834 (21%)
CNH 1503..1774 CDD:279162
rock2XP_004914525.1 STKc_ROCK2 25..403 CDD:270771 162/430 (38%)
S_TKc 78..340 CDD:214567 117/276 (42%)
Smc <432..1113 CDD:224117 174/834 (21%)
HR1_ROCK2 492..558 CDD:212028 13/68 (19%)
Rho_Binding 966..1032 CDD:286056 18/83 (22%)
PH_ROCK 1138..1242 CDD:269948 19/121 (16%)
C1 1246..1292 CDD:237996 11/58 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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