DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and dmpk

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_004917016.2 Gene:dmpk / 100491375 XenbaseID:XB-GENE-949801 Length:587 Species:Xenopus tropicalis


Alignment Length:574 Identity:177/574 - (30%)
Similarity:292/574 - (50%) Gaps:65/574 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VAEAICREGLLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLIKTLIGQ 121
            |.:|:  :.|||....:.||.....| .::.:||||::...|:.:..|:.|:...||.|..:||:
 Frog     9 VPQAL--DALLDLMLCVCNELATSPL-AQETHIAEFLSWADPLAQLIREQRMKRSDFDILKVIGR 70

  Fly   122 GYFGNVHLVVERQTNDIYAMKKIKK-SVVTTSQV---KEERDIMSIRNSEWLINLQYAFQDNDNL 182
            |.|..|.:|.::..:.:||||.:.| .::..|.|   ::|||::...:..|:..|.:||||::.|
 Frog    71 GAFSEVAVVRKKSNSQVYAMKIMNKWDLLKRSDVACYRQERDVLVNGDKRWITQLHFAFQDDNYL 135

  Fly   183 YLVMEYMPGGDLLSLMSRHGP-FDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHI 246
            ||:|:|..|||||||:|:... |...:|.|||||:.:|:.::|.:|:|||||||:|:|::..|||
 Frog   136 YLIMDYYVGGDLLSLLSKFSDGFPSHMAVFYLAEMVMAISSVHSLGFVHRDIKPDNMLLNCAGHI 200

  Fly   247 KLADFGNAAALDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGY 311
            :|.|||:...|..||.|.|...||||||::||:|..:....|...       |.||:||:|:..|
 Frog   201 RLGDFGSCLKLRGDGTVSSSIAVGTPDYLSPEILLAVEDPTLCYG-------VECDWWSLGVCAY 258

  Fly   312 ELICETTPFHEDNVHETYSKILSHCEESHLKELISF-PADLKVSVNYRNLIESLVTNPSKRL--- 372
            |:....|||:.|.|.|||.||:      |.||...| |:..:||....:.|.||:.:...||   
 Frog   259 EMYFGYTPFYADLVVETYGKII------HFKEHFIFPPSSSEVSSEALSFISSLICDRETRLGRG 317

  Fly   373 SYERIKNHPFFSEIPWGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSN 437
            ..:..:.||.|:.|.|..:...:||.:|......||||| |.:..:.........::|:....|:
 Frog   318 GLQDFQMHPLFAGIEWERLMDSIPPYVPESEGATDTSNF-DMVEDQLSEMVSGGGETLSDVGDSS 381

  Fly   438 DFSGKDLPFIGYSFVHMEKSAISATTDEKLQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRKT 502
            .. |..|||:|||:          |..|..:|.:      ..|.:||.. .|:.|:...|::...
 Frog   382 PL-GVHLPFVGYSY----------TVREDDREHV------WGTLKNECD-CKRGLVPNPQNITHG 428

  Fly   503 DN-----KSQVVAD----AKMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEEMWSKKEATI 558
            |.     :|.:::|    .:.||:..:.:..|.::..:|.:.....|..:..::.|:.||     
 Frog   429 DTVAAPFESMLLSDQQNALESEIQTQESLSTEISLLKSTNQHLASRLNEADLLNSELQSK----- 488

  Fly   559 TDLLRLNRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEEC 612
               :|...:|..|.:...|:|.|:....::.|:.:...:..:|    |.:.:.|
 Frog   489 ---IRTLEEKLREKEKEEEERREEVFVPRRWEVCNEKFETTSR----NRQLDNC 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 132/349 (38%)
S_TKc 113..383 CDD:214567 110/278 (40%)
Smc 487..1222 CDD:224117 24/135 (18%)
CNH 1503..1774 CDD:279162
dmpkXP_004917016.2 PKc_like 60..395 CDD:419665 132/359 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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