DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and stk38

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_031752645.1 Gene:stk38 / 100379821 XenbaseID:XB-GENE-5742605 Length:497 Species:Xenopus tropicalis


Alignment Length:445 Identity:138/445 - (31%)
Similarity:221/445 - (49%) Gaps:93/445 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EAICREGLLDAFCLLYNECDKDTLKKRDRNIA------EFVNKFRPIIEETRKLRVNADDFLIKT 117
            :|:..|||.|.             :||.|..|      ||:        ..::.|:..:||....
 Frog    82 KAMDEEGLRDE-------------EKRMRRSAHARKETEFL--------RLKRTRLGLEDFESLK 125

  Fly   118 LIGQGYFGNVHLVVERQTNDIYAMKKIKKSVVTTSQ----VKEERDIMSIRNSEWLINLQYAFQD 178
            :||:|.||.|.||.::.|..:||||.::|:.:...:    ::.||||:...:|.|::.:.|:|||
 Frog   126 VIGRGAFGEVRLVQKKDTGHVYAMKILRKTDMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD 190

  Fly   179 NDNLYLVMEYMPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRF 243
            ..||||:||::||||:::|:.:.....|:..:||:||..:|:.::|::|::||||||:|:|:|..
 Frog   191 KLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK 255

  Fly   244 GHIKLADFG----------------------------------NAAALDRDGHVLSLSPVGTPDY 274
            ||:||:|||                                  .|....|:...|:.|.||||||
 Frog   256 GHVKLSDFGLCTGLKKAHRTDFYRNLNHSLPSDFNFQNMNSKRKAETWKRNRRQLAFSTVGTPDY 320

  Fly   275 IAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSHCEES 339
            ||||:.......||            ||:||:|:|.||::....||..:...|||.|::      
 Frog   321 IAPEVFLQTGYNKL------------CDWWSLGVIMYEMLIGYPPFCSETPQETYKKVM------ 367

  Fly   340 HLKELISFPADLKVSVNYRNLIESLVTNPSKRL---SYERIKNHPFFSEIPWGSIRSQVPPIIP- 400
            :.||.:.||.::.:|...::||........:|:   ..|.||.:.||..:.|..||.: |..|| 
 Frog   368 NWKETLIFPPEVPISEKAKDLILRFCCEWEQRVGAPGVEEIKTNHFFEGVDWEHIRER-PAAIPI 431

  Fly   401 TVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSNDFSGKDLPFIGYSFVHME 455
            .::|.||||||::.......:..|.     .:|...::|..||..||.|::...|
 Frog   432 EIKSIDDTSNFDEFPDSDILKPMGA-----VSNHPESEFKNKDWVFINYTYKRFE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 125/382 (33%)
S_TKc 113..383 CDD:214567 101/310 (33%)
Smc 487..1222 CDD:224117
CNH 1503..1774 CDD:279162
stk38XP_031752645.1 STKc_NDR1 119..494 CDD:270777 126/387 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.