DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and Sry-delta

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:437 Identity:85/437 - (19%)
Similarity:146/437 - (33%) Gaps:139/437 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GAKTMICRACLVLLGPQDA--CHNLDSEQDLASKYYGC---------TGEDAV---RDLPPQLV- 83
            ||:  :|..|...|...|.  .:.:.:::.|.::..|.         :|||.:   .::|...| 
  Fly    57 GAR--LCPRCFQELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVPESGEDILVEEVEIPQSDVE 119

  Fly    84 LKSICECCYQLVQKFHDFQRMCAESLRNF-------------EKLLQDIDIG------------- 122
            ..:..|.....|:...|.:....|..|.|             |.:.:|:|:|             
  Fly   120 TDADAEADALFVELVKDQEESDTEIKREFVDEEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGE 184

  Fly   123 --------------CHKLEDHTWHDLDTPSESNESTNPEAQSHAPCIAATQEIVSFIWPQVCLPL 173
                          |.|:. ::|:.|........|..|.                    .:| |:
  Fly   185 DRPTKKRVKQECTTCGKVY-NSWYQLQKHISEEHSKQPN--------------------HIC-PI 227

  Fly   174 AVILSRITLGASLEEEVYVIEDESAKQDLGQEKLSISSKLLGARKRRGVRHTLECRICHRGFYKP 238
            ..::.|               ||        |.|.:...|...:..:      :||.|.:.|.:|
  Fly   228 CGVIRR---------------DE--------EYLELHMNLHEGKTEK------QCRYCPKSFSRP 263

  Fly   239 SLLEAHMQQHEGLRPYTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTANRSLK 303
            .....||:.|...:.|.|..|...:::.|||.:|  ::.:.|:...||  |..||..:.:.::..
  Fly   264 VNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNH--RLRHEAEENPII--CSICNVSFKSRKTFN 324

  Fly   304 YHMRRTHERYHESESPDARHICEECGKCFAR----KAHLTRHK--MVHGSVEGRRYCCECCDRRF 362
            :     |...|:...|  ||.|..|.|.|..    |.|:..|:  :|:|..|...     .|.:.
  Fly   325 H-----HTLIHKENRP--RHYCSVCPKSFTERYTLKMHMKTHEGDVVYGVREEAP-----ADEQQ 377

  Fly   363 YTKENMVD--------HLLRKHGNKNLLLRCRKCGRIFQNSVELNAH 401
            ..:|..||        .::....::|... |..|...|:|..||..|
  Fly   378 VVEELHVDVDESEAAVTVIMSDNDENSGF-CLICNTNFENKKELEHH 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 18/103 (17%)
C2H2 Zn finger 228..248 CDD:275368 7/19 (37%)
SFP1 <243..310 CDD:227516 16/66 (24%)
C2H2 Zn finger 256..313 CDD:275368 13/56 (23%)
SFP1 <287..376 CDD:227516 22/102 (22%)
C2H2 Zn finger 289..314 CDD:275368 4/24 (17%)
C2H2 Zn finger 325..345 CDD:275368 7/25 (28%)
C2H2 Zn finger 355..376 CDD:275368 4/28 (14%)
C2H2 Zn finger 385..405 CDD:275368 7/17 (41%)
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 44/215 (20%)
C2H2 Zn finger 225..245 CDD:275368 7/43 (16%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 6/21 (29%)
C2H2 Zn finger 310..327 CDD:275370 3/21 (14%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)

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