DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and Sry-beta

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:315 Identity:67/315 - (21%)
Similarity:118/315 - (37%) Gaps:101/315 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RMCAESLRNFEKLLQDID----------IGCHKLEDHTWHDLDTPSESNESTNPEAQSHAPCIAA 157
            |.|.|.|.|:::|::::.          :||.::|.        .:|:.:.....|:...|....
  Fly    60 RDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEG--------KAETKQQAAKRARVQVPAFKI 116

  Fly   158 TQ---------------------------EIVSFIWPQVCLPLAVILSRITLGASLEEEVYV--- 192
            .|                           |...|..|...:|            |.|||.:.   
  Fly   117 VQATALKEPERQPGEEDECEEFMKEEMLDEEFQFSEPDDSMP------------SSEEEFFTETT 169

  Fly   193 ---------------IEDESAKQDLGQEKLSISSKLLGARKR------------RGVRHTLECRI 230
                           :.:...|.|..|:....:..:.|.:.:            .| :..||||.
  Fly   170 EIPCHICGEMFSSQEVLERHIKADTCQKSEQATCNVCGLKVKDDEVLDLHMNLHEG-KTELECRY 233

  Fly   231 CHRGF-YKPSLLEAHMQQHEGLRPYTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNK 294
            |.:.| :|.::|. ||:.|...:.|.|..|.:.::.:.|:.:||  |.::|:...:|  |..|::
  Fly   234 CDKKFSHKRNVLR-HMEVHWDKKKYQCDKCGERFSLSWLMYNHL--MRHDAEENALI--CEVCHQ 293

  Fly   295 VYTANRSLKYHMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVE 349
            .:...|:.|:|:|.     |:::.|  |:.|.:|.|.|..|..|..||.||..||
  Fly   294 QFKTKRTYKHHLRT-----HQTDRP--RYPCPDCEKSFVDKYTLKVHKRVHQPVE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 5/11 (45%)
C2H2 Zn finger 228..248 CDD:275368 8/20 (40%)
SFP1 <243..310 CDD:227516 18/66 (27%)
C2H2 Zn finger 256..313 CDD:275368 14/56 (25%)
SFP1 <287..376 CDD:227516 21/63 (33%)
C2H2 Zn finger 289..314 CDD:275368 6/24 (25%)
C2H2 Zn finger 325..345 CDD:275368 8/19 (42%)
C2H2 Zn finger 355..376 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 1/19 (5%)
C2H2 Zn finger 231..251 CDD:275368 8/20 (40%)
C2H2 Zn finger 259..308 CDD:275368 14/57 (25%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:395048 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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