DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and scrt

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_523911.2 Gene:scrt / 38469 FlyBaseID:FBgn0004880 Length:653 Species:Drosophila melanogaster


Alignment Length:91 Identity:21/91 - (23%)
Similarity:36/91 - (39%) Gaps:16/91 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SPPE-------TLSATLQW-----LCPDCSGETNPLPVSGVAAGYGSVGSDLVAAIHSIEADETL 96
            |||.       |::|...|     |.|.|:    |.|::.|.....:|.:..:..:.::|..:..
  Fly   338 SPPSITAIAAATVAAATAWWASHGLLPVCA----PAPITCVPFSTVAVPTPAMTEMDTVENTQPF 398

  Fly    97 SAEEKAKKKQQLLSGKGVVDEDDEEE 122
            ..:..|.:.|.|.|.......||.:|
  Fly   399 EKQNTALQDQNLASKSPASSSDDSDE 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 18/82 (22%)
C2H2 Zn finger 228..248 CDD:275368
SFP1 <243..310 CDD:227516
C2H2 Zn finger 256..313 CDD:275368
SFP1 <287..376 CDD:227516
C2H2 Zn finger 289..314 CDD:275368
C2H2 Zn finger 325..345 CDD:275368
C2H2 Zn finger 355..376 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
scrtNP_523911.2 zf-C2H2 467..489 CDD:395048
C2H2 Zn finger 469..489 CDD:275370
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 526..546 CDD:275368
zf-H2C2_2 539..562 CDD:463886
C2H2 Zn finger 554..574 CDD:275368
zf-C2H2 554..574 CDD:395048
zf-H2C2_2 566..590 CDD:463886
C2H2 Zn finger 582..599 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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