DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and Scrt2

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001178834.1 Gene:Scrt2 / 366229 RGDID:1564796 Length:305 Species:Rattus norvegicus


Alignment Length:149 Identity:44/149 - (29%)
Similarity:69/149 - (46%) Gaps:18/149 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 YTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTANRSLKYHMRRTHERYHESES 318
            :.|..|.|:||.::.|..| :|.|.:.| :::...||:|.|.|.:..:|..|: .||        
  Rat   155 HACAECGKTYATSSNLSRH-KQTHRSLD-SQLARKCPTCGKAYVSMPALAMHV-LTH-------- 208

  Fly   319 PDARHICEECGKCFARKAHLTRHKMVHGSVEGRR-YCCECCDRRFYTKENMVDHLLRKHGNKNLL 382
             :.||.|..|||.|:|...|..|...|   .|.: :.|..|.:.|..:.|:..|:......|:  
  Rat   209 -NLRHKCGVCGKAFSRPWLLQGHMRSH---TGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKH-- 267

  Fly   383 LRCRKCGRIFQNSVELNAH 401
            .|||:|.:.|.....|:.|
  Rat   268 YRCRQCDKSFALKSYLHKH 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262
C2H2 Zn finger 228..248 CDD:275368
SFP1 <243..310 CDD:227516 17/55 (31%)
C2H2 Zn finger 256..313 CDD:275368 19/56 (34%)
SFP1 <287..376 CDD:227516 26/89 (29%)
C2H2 Zn finger 289..314 CDD:275368 9/24 (38%)
C2H2 Zn finger 325..345 CDD:275368 8/19 (42%)
C2H2 Zn finger 355..376 CDD:275368 5/20 (25%)
C2H2 Zn finger 385..405 CDD:275368 6/17 (35%)
Scrt2NP_001178834.1 C2H2 Zn finger 157..177 CDD:275368 8/20 (40%)
COG5048 <210..>277 CDD:227381 22/71 (31%)
C2H2 Zn finger 214..234 CDD:275368 8/19 (42%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 270..286 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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