DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and CG12942

DIOPT Version :9

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster


Alignment Length:498 Identity:102/498 - (20%)
Similarity:165/498 - (33%) Gaps:144/498 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GAKTMICRACL------VLLGPQDACHNLDSEQDLASKYYGCTGEDAVRDLPP--QLVLKSIC-E 89
            |:|   |||||      |.|..:  ..||...:..|.....||..| :|.:.|  .|....|| .
  Fly    19 GSK---CRACLSVDRKTVQLNAE--VPNLQKTRTYAQSLKQCTNLD-LRVISPGGYLWPMQICVR 77

  Fly    90 CCYQLVQKFHDFQRMCAESLRNFEKLLQDIDIGC------HKLEDHT--WHDL-----------D 135
            ||..|....| |..|..||....:...:.:.:..      .|..:.|  |:..           :
  Fly    78 CCRALEVAMH-FVEMALESNLKLQAEAKSVKLPSPTGELKRKASNETIPWNQFSQEFEQFVEGYE 141

  Fly   136 TPSESN---------ESTNPEAQSHAPCIAATQEIVSF--------------------------- 164
            .|.|.|         ...:.:|.|.:.......|::.|                           
  Fly   142 GPIEENVLYMRGTKVPRLDVDASSSSETAPKEDEVILFDVKYDTNDLEEEDENDGSDAKNNETFF 206

  Fly   165 ---IWPQVCLPLAVILSRIT-----------LGASLEEEVYVIE------------DESAKQDLG 203
               |.|...:.:..:..:..           .|...:||..:|:            .:|.|.:..
  Fly   207 ENSITPGESVMVVSVAEKAVENNNNYNFNNKNGDVTDEECDLIQRALEMTLNDDGCSQSPKNEAS 271

  Fly   204 QEK------LSISS----KLLGARKRRGVRHTLECRIC-------------HRGFYKPSLLEAHM 245
            .|.      :.:||    ||.......|....|:|.||             ::..:|.|::|..:
  Fly   272 NETQLKSNGIEVSSPLFIKLATTSSTTGNIPILKCNICQYTHTDAEQLKIHYKSIHKISMMEDDI 336

  Fly   246 QQHEGLRPYTCVHCAKSYARANL--LESHLRQMHN-NADAARIIYA---CPSCNKVYTANRSLKY 304
            ......:.:.|..| .||...:.  ::.||...|. :.|.....|.   ||:|::::...||.:.
  Fly   337 IGLNKNQNFKCRPC-NSYETKDRSEMQKHLIDHHKIDGDFEMYCYMQANCPACDRIFKDQRSARK 400

  Fly   305 HMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRRYC-------CECCDRRF 362
            |..|.|.....:.||...:.|..|.|.|.:||.|..|         :|:|       |..||::|
  Fly   401 HYTRVHTPVQIAVSPTESYACTACDKVFNQKASLHSH---------QRFCQVKDVVHCSFCDQQF 456

  Fly   363 YTKENMVDHLLRKHGNKNLLLRCRKCGRIFQNSVELNAHGRKH 405
            .:......||.:.|..:. :..|..|.|.|:::..|..|.::|
  Fly   457 NSMRKYELHLQQLHAVET-VHECEICRRSFKSAETLTMHRKRH 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:285071 26/84 (31%)
C2H2 Zn finger 228..248 CDD:275368 6/32 (19%)
C2H2 Zn finger 256..313 CDD:275368 17/62 (27%)
C2H2 Zn finger 289..314 CDD:275368 8/24 (33%)
zf-C2H2 323..345 CDD:278523 8/21 (38%)
C2H2 Zn finger 325..345 CDD:275368 8/19 (42%)
C2H2 Zn finger 355..376 CDD:275368 6/20 (30%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
CG12942NP_610628.2 zf-AD 22..101 CDD:285071 26/82 (32%)
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 421..470 CDD:275368 16/57 (28%)
C2H2 Zn finger 449..466 CDD:275371 4/16 (25%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 505..526 CDD:275368
C2H2 Zn finger 534..555 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440056
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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