DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and CG12299

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster


Alignment Length:433 Identity:94/433 - (21%)
Similarity:139/433 - (32%) Gaps:136/433 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PPQLVLKSICECC----------YQLVQKFHD-----------------------FQRMCAESLR 110
            ||.|...  |.||          ||.:...|.                       |:.:|     
  Fly    43 PPDLTFH--CMCCAEFFVHPLALYQHMNTLHPHEPGNGQQEQESPGDESEDYSWIFEPVC----- 100

  Fly   111 NFEKLLQD------------IDIGCHKLEDHTWHDLDTPSESNESTNPEAQSHAPCIAA---TQE 160
               :|.:|            .|......:|....|.|:.|.|:.|:|..:.|.:....:   ||:
  Fly   101 ---ELAEDGSDSSDGSASSGSDSSSSSDDDDDDDDDDSSSSSSSSSNSSSSSSSVPTTSNSNTQQ 162

  Fly   161 IVSFIWPQVCLPLAVILSRITLGASLEEEVYVIED--ESAKQDLGQEKLSIS------------S 211
            ....:.|         |..:..|....|....:.|  ||....:.|..:|::            |
  Fly   163 SQESVQP---------LHGLVAGPGYNEFQLQMTDPRESTSIFMVQPTVSVTPLQQLLPPAPTVS 218

  Fly   212 KLLG-----ARKRRGVRHTL----------------ECRICHRGFYKPSLLEAHMQQHEGLRPYT 255
            ..||     .::|||.|..:                :|..|...|.....|..|::.|...:|:.
  Fly   219 PGLGLQSTPIKRRRGRRSNIGAPVMDPALNGNQKCFQCTHCEASFPNAGDLSKHVRSHITNKPFQ 283

  Fly   256 CVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTANRSLKYHMRR------------ 308
            |..|.|::.....|.:|:| :|:....    |.|..|.|.:|.:.||..|||.            
  Fly   284 CSICQKTFTHIGSLNTHIR-IHSGEKP----YKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQC 343

  Fly   309 -----------THERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRRYCCECCDRRF 362
                       .|::.|  .:|....||.||.:.|..:|.|..|..:|  .:...|.|..|...|
  Fly   344 DKGFINYSSLLLHQKTH--IAPTETFICPECEREFKAEALLDEHMRMH--TQELVYQCAICREAF 404

  Fly   363 YTKENMVDHLLRKHGNKNLLLRCRKCGRIFQNSVELNAHGRKH 405
            .....:|.|:....|.|.  ..|..|.|.|..|..||.|.|.|
  Fly   405 RASSELVQHMKNHMGEKP--FTCSLCDRSFTQSGSLNIHMRIH 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 11/68 (16%)
C2H2 Zn finger 228..248 CDD:275368 5/19 (26%)
SFP1 <243..310 CDD:227516 20/89 (22%)
C2H2 Zn finger 256..313 CDD:275368 18/79 (23%)
SFP1 <287..376 CDD:227516 28/111 (25%)
C2H2 Zn finger 289..314 CDD:275368 10/47 (21%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
C2H2 Zn finger 355..376 CDD:275368 5/20 (25%)
C2H2 Zn finger 385..405 CDD:275368 9/19 (47%)
CG12299NP_609448.1 COG5048 245..>501 CDD:227381 54/212 (25%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
C2H2 Zn finger 284..304 CDD:275368 6/20 (30%)
zf-H2C2_2 296..321 CDD:463886 8/29 (28%)
C2H2 Zn finger 312..332 CDD:275368 9/19 (47%)
C2H2 Zn finger 340..360 CDD:275368 1/19 (5%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:463886 8/26 (31%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..462 CDD:463886 5/9 (56%)
C2H2 Zn finger 453..473 CDD:275368
C2H2 Zn finger 481..501 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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