DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and scrt2

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_998802.1 Gene:scrt2 / 325372 ZFINID:ZDB-GENE-030131-4097 Length:312 Species:Danio rerio


Alignment Length:272 Identity:66/272 - (24%)
Similarity:110/272 - (40%) Gaps:66/272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 SRITLGASLEEEVYVIEDESAKQDLGQEK---LSISSKLL--------GARKRRGVRH--TLECR 229
            ||.:||..|.|..| |:|..:..:..:||   :.::|:||        |...:..:.|  :.:..
Zfish    40 SRSSLGVRLCENGY-IKDYISSSEYTEEKQADMKLNSELLYSPVSSGGGEYCQPDLEHPDSPQSG 103

  Fly   230 ICHRGFY---KPSLLEAHMQQ-------------------------------HEGLRPYTCVHCA 260
            :..||::   ..||.|.:...                               :.|...:||..|.
Zfish   104 LTARGYFSSESESLSEGYTMDAFFISDGRSRRKGEVSEAAKADEVEKEVVGVNNGGARHTCNECG 168

  Fly   261 KSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTANRSLKYHMRRTHERYHESESPDARHIC 325
            |:||.::.|..| :|.|.:.| :::...||:|:|||.:..:|..|: .||         |.:|.|
Zfish   169 KTYATSSNLSRH-KQTHRSLD-SKMARKCPTCDKVYVSMPALAMHI-LTH---------DLKHKC 221

  Fly   326 EECGKCFARKAHLTRHKMVHGSVEGRR-YCCECCDRRFYTKENMVDHLLRKHGNKNLLLRCRKCG 389
            ..|.|.|:|...|..|...|   .|.: :.|..|.:.|..:.|:..|:......|:  ..|::|.
Zfish   222 HVCSKAFSRPWLLQGHMRSH---TGEKPFACAHCGKAFADRSNLRAHMQTHSAFKH--YSCKRCN 281

  Fly   390 RIFQNSVELNAH 401
            :.|.....||.|
Zfish   282 KTFALKSYLNKH 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262
C2H2 Zn finger 228..248 CDD:275368 5/53 (9%)
SFP1 <243..310 CDD:227516 20/97 (21%)
C2H2 Zn finger 256..313 CDD:275368 20/56 (36%)
SFP1 <287..376 CDD:227516 26/89 (29%)
C2H2 Zn finger 289..314 CDD:275368 10/24 (42%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
C2H2 Zn finger 355..376 CDD:275368 5/20 (25%)
C2H2 Zn finger 385..405 CDD:275368 6/17 (35%)
scrt2NP_998802.1 zf-C2H2 162..184 CDD:395048 9/22 (41%)
C2H2 Zn finger 164..184 CDD:275368 8/20 (40%)
C2H2 Zn finger 195..212 CDD:275371 7/16 (44%)
COG5048 219..>295 CDD:227381 22/80 (28%)
C2H2 Zn finger 221..241 CDD:275368 7/19 (37%)
zf-H2C2_2 234..257 CDD:463886 6/25 (24%)
zf-C2H2 247..269 CDD:395048 5/21 (24%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..293 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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