DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and che-1

DIOPT Version :9

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001076598.1 Gene:che-1 / 183847 WormBaseID:WBGene00000483 Length:273 Species:Caenorhabditis elegans


Alignment Length:122 Identity:35/122 - (28%)
Similarity:58/122 - (47%) Gaps:17/122 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 RPYTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTANRSLKYHMRRTHERYHES 316
            :|:.|..|.|::::|..|.:| :::|.....    :.||.||:.::.:.||.     ||.|.|..
 Worm   164 KPFRCQTCGKAFSQAANLTAH-KRIHTGEKP----FMCPVCNRPFSQSSSLV-----THRRTHTG 218

  Fly   317 ESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRR-YCCECCDRRFYTKENMVDHL 372
            |.|   :.|.:|.|.|...:.||:|...|   .|.: |.|..|..:|....|:..|:
 Worm   219 ERP---YPCAQCEKAFTDSSTLTKHLRTH---TGHKPYVCSICMMKFTQSGNLHRHM 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:285071
C2H2 Zn finger 228..248 CDD:275368
C2H2 Zn finger 256..313 CDD:275368 15/56 (27%)
C2H2 Zn finger 289..314 CDD:275368 9/24 (38%)
zf-C2H2 323..345 CDD:278523 7/21 (33%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
C2H2 Zn finger 355..376 CDD:275368 5/18 (28%)
C2H2 Zn finger 385..405 CDD:275368
che-1NP_001076598.1 zf-C2H2 166..188 CDD:278523 6/22 (27%)
C2H2 Zn finger 168..188 CDD:275368 6/20 (30%)
zf-H2C2_2 180..205 CDD:290200 7/29 (24%)
C2H2 Zn finger 196..216 CDD:275368 9/24 (38%)
zf-H2C2_2 208..232 CDD:290200 11/31 (35%)
C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
zf-H2C2_2 237..261 CDD:290200 9/26 (35%)
C2H2 Zn finger 252..272 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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