DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and pag-3

DIOPT Version :9

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_510480.1 Gene:pag-3 / 181588 WormBaseID:WBGene00003909 Length:336 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:285071
C2H2 Zn finger 228..248 CDD:275368
C2H2 Zn finger 256..313 CDD:275368
C2H2 Zn finger 289..314 CDD:275368
zf-C2H2 323..345 CDD:278523
C2H2 Zn finger 325..345 CDD:275368
C2H2 Zn finger 355..376 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
pag-3NP_510480.1 C2H2 Zn finger 128..148 CDD:275368
zf-H2C2_2 140..165 CDD:290200
zf-C2H2 154..176 CDD:278523
C2H2 Zn finger 156..176 CDD:275368
COG5048 164..>233 CDD:227381
zf-H2C2_2 169..193 CDD:290200
C2H2 Zn finger 184..204 CDD:275368
zf-H2C2_2 196..221 CDD:290200
C2H2 Zn finger 212..232 CDD:275368
zf-H2C2_2 224..247 CDD:290200
C2H2 Zn finger 240..260 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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