DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10654 and Scrt1

DIOPT Version :10

Sequence 1:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_570963.1 Gene:Scrt1 / 170729 MGIID:2176606 Length:348 Species:Mus musculus


Alignment Length:149 Identity:44/149 - (29%)
Similarity:70/149 - (46%) Gaps:18/149 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 YTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTANRSLKYHMRRTHERYHESES 318
            :.|..|.|:||.::.|..| :|.|.:.| :::...||:|.|||.:..::..|: .||        
Mouse   191 HACGECGKTYATSSNLSRH-KQTHRSLD-SQLARRCPTCGKVYVSMPAMAMHL-LTH-------- 244

  Fly   319 PDARHICEECGKCFARKAHLTRHKMVHGSVEGRR-YCCECCDRRFYTKENMVDHLLRKHGNKNLL 382
             |.||.|..|||.|:|...|..|...|   .|.: :.|..|.:.|..:.|:..|:......|:  
Mouse   245 -DLRHKCGVCGKAFSRPWLLQGHMRSH---TGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKH-- 303

  Fly   383 LRCRKCGRIFQNSVELNAH 401
            .:|::|.:.|.....||.|
Mouse   304 FQCKRCKKSFALKSYLNKH 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262
C2H2 Zn finger 228..248 CDD:275368
SFP1 <243..310 CDD:227516 17/55 (31%)
C2H2 Zn finger 256..313 CDD:275368 19/56 (34%)
SFP1 <287..376 CDD:227516 27/89 (30%)
C2H2 Zn finger 289..314 CDD:275368 9/24 (38%)
C2H2 Zn finger 325..345 CDD:275368 8/19 (42%)
C2H2 Zn finger 355..376 CDD:275368 5/20 (25%)
C2H2 Zn finger 385..405 CDD:275368 6/17 (35%)
Scrt1NP_570963.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..190
C2H2 Zn finger 193..213 CDD:275368 8/20 (40%)
C2H2 Zn finger 224..241 CDD:275371 6/16 (38%)
COG5048 <245..>313 CDD:227381 21/72 (29%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 5/19 (26%)
C2H2 Zn finger 306..322 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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