DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10638 and gclm

DIOPT Version :9

Sequence 1:NP_001287050.1 Gene:CG10638 / 39424 FlyBaseID:FBgn0036290 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_009302077.1 Gene:gclm / 333974 ZFINID:ZDB-GENE-030131-5906 Length:274 Species:Danio rerio


Alignment Length:209 Identity:49/209 - (23%)
Similarity:85/209 - (40%) Gaps:30/209 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KREDIFLVTKLWNIFHDPERVEGICRKQLSNFGLDYIDLYLMHMPVGYKYVDDNTLLPKNEDDVL 135
            :||::.:..||:....|...:.........:.|:..:|..::..|          .||:.|...|
Zfish    84 EREELKVSVKLFLTEWDCSSIRSAVDMACLSLGVSQLDSVIIAPP----------SLPEGESQTL 138

  Fly   136 QLSDVDYLDTYKAMEKLVKLGLVRSIGVSNFNSEQLARVLANC--EIKPVTNQVE-CSPALNQKA 197
                ......::.:|.||:...:.:||.|:.: :.|...|.|.  :|||.:|||. .|..:....
Zfish   139 ----THLQPLWQELESLVQSQKIAAIGTSDLD-KTLLEQLYNWAQQIKPSSNQVNLASCCVMPPD 198

  Fly   198 LTAFCKKNDVTLTGYTPLGKPKPDIQKPDFIYSPEVAVIAKKYGKTTPQIVLRYLV-----GL-- 255
            ||||.|:.|:.|..::   .||..|....|..:.:.:....:......:.||||.:     |:  
Zfish   199 LTAFAKEFDIQLLTHS---DPKELISAAGFQEAVQGSSQELQVDDWRLEWVLRYSIIVKSRGIIK 260

  Fly   256 --GVIPIPKSSNTN 267
              |.|...|.||.:
Zfish   261 AKGYIVHAKKSNNH 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10638NP_001287050.1 ARA1 5..302 CDD:223729 49/209 (23%)
Tas 5..297 CDD:223739 49/209 (23%)
gclmXP_009302077.1 Aldo_ket_red <85..255 CDD:294321 43/187 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.