DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10657 and rlbp1

DIOPT Version :9

Sequence 1:NP_648579.3 Gene:CG10657 / 39423 FlyBaseID:FBgn0036289 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:269 Identity:82/269 - (30%)
Similarity:139/269 - (51%) Gaps:16/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CGLSPAMKL-VAKEELHEDENIRRQALAQFREWIEKHPH----IRKCRTDTV------FLLRFLR 82
            ||..|...: .||:||:|.|..|..|:.:.|..:::..:    :.|...|.|      |.|||:|
 Frog    37 CGKLPEYTIQKAKDELNETEEKRESAVKELRALVQEKANAGEELCKAVADKVKDKGDDFFLRFIR 101

  Fly    83 TKKFSVPSACEMLERYLTIRQLFPQWFKQLDINDPAINEIFENGYLVPLPQRDSTGRQVIFSVAA 147
            .:||.|..|.|:|:.|:..||.:|:.|:  |:...|:....|.||...|..||..||.::.....
 Frog   102 ARKFDVSRAYELLKGYVNFRQQYPELFE--DLTPEAVRSTIEAGYPGILTSRDKNGRVILLFNIE 164

  Fly   148 KFDPYKFTSVQMARVHSLVCEALLDDEDSQVAGYVYINDESGMNMGFVSLWSLTDLRSIVKCIQN 212
            .:|..:.|..::.|.:.::.|:||::|::|:.|:..|.:..|..|...|....::|:.:|..:|:
 Frog   165 SWDYEEITFDEILRAYCIILESLLENEETQINGFCIIENFKGFTMQQASGIKPSELKKMVDMLQD 229

  Fly   213 STPMRHKETHFVNIPHYANRIIELGVSMLSDKLKKRIIVH-KNVDILKTKIDPAILPKEYGGTVP 276
            |.|.|.|..||::.|.|......:....|..||.:|:.|| .:::....:||..|||.::||.:|
 Frog   230 SFPARFKAVHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADILPADFGGNLP 294

  Fly   277 IAD--MIAQ 283
            ..|  :||:
 Frog   295 KYDGKIIAE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10657NP_648579.3 CRAL_TRIO_N 52..98 CDD:215024 16/55 (29%)
CRAL_TRIO 126..274 CDD:279044 43/148 (29%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 16/56 (29%)
CRAL_TRIO 143..292 CDD:306996 43/148 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9363
Panther 1 1.100 - - O PTHR10174
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

Return to query results.
Submit another query.