DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10657 and rlbp1a

DIOPT Version :10

Sequence 1:NP_648579.3 Gene:CG10657 / 39423 FlyBaseID:FBgn0036289 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:273 Identity:81/273 - (29%)
Similarity:129/273 - (47%) Gaps:21/273 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DYPYVCGLSPAMKL------VAKEELHEDENIRRQALAQFREWIE----KHPHIRKCRTDTV--- 75
            |:..|.|  |.|||      .||:||:|.:..|..|:.:.|..|:    :...:.|...|..   
Zfish    28 DHGPVYG--PCMKLPDHTKQKAKDELNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKE 90

  Fly    76 ---FLLRFLRTKKFSVPSACEMLERYLTIRQLFPQWFKQLDINDPAINEIFENGYLVPLPQRDST 137
               .||||:|.:||.|..|.|:::.|:..|:.:|:.|:.|  ...|:....|.||...|..||..
Zfish    91 PDSLLLRFIRARKFDVARAHELMKGYVRFRRDYPELFENL--TPEAVRSTIEAGYPRILSTRDKN 153

  Fly   138 GRQVIFSVAAKFDPYKFTSVQMARVHSLVCEALLDDEDSQVAGYVYINDESGMNMGFVSLWSLTD 202
            ||.|:......:|..:.|..:..|.:.::.|.||::|::|:.|:|.|.:..|..|...|....|:
Zfish   154 GRVVLLFNIDNWDLEEVTFDETLRAYCVILEKLLENEETQINGFVLIENFKGFTMQHASGIKHTE 218

  Fly   203 LRSIVKCIQNSTPMRHKETHFVNIPHYANRIIELGVSMLSDKLKKRIIVH-KNVDILKTKIDPAI 266
            |:.:|..:|:|.|.|.|..|.::.|.|......:....:..||.:|:.|| ..:|.........|
Zfish   219 LKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDELDGYLRDFGAEI 283

  Fly   267 LPKEYGGTVPIAD 279
            ||.::.||.|..|
Zfish   284 LPPDFDGTGPACD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10657NP_648579.3 CRAL_TRIO_N 52..98 CDD:215024 15/55 (27%)
CRAL_TRIO 126..273 CDD:459890 42/147 (29%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 15/56 (27%)
SEC14 140..291 CDD:469559 43/150 (29%)

Return to query results.
Submit another query.