DRSC/TRiP Functional Genomics Resources

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Protein Alignment eyg and crx

DIOPT Version :10

Sequence 1:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_694419.1 Gene:crx / 81881 ZFINID:ZDB-GENE-010403-1 Length:281 Species:Danio rerio


Alignment Length:266 Identity:85/266 - (31%)
Similarity:119/266 - (44%) Gaps:52/266 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNL 411
            |.||.||||:..||:.||..|.|:.||.:..||.::.:.:|.|:||||||.|||||.|:.|:...
Zfish    37 KQRRERTTFTRTQLDILEALFTKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQTS 101

  Fly   412 LK------RQRSSPANPLHSQQ-SNDAPASSPTPSNHSSASTSAPVAPV----PPPQQPL--PLC 463
            .:      :::|||...|.|.. ::.:..::|||:  ...|.||..|||    |....||  |||
Zfish   102 GQPKPRPPKKKSSPPPDLTSDPGTSSSVVAAPTPT--VPPSVSAGTAPVSVWSPTSLSPLPDPLC 164

  Fly   464 GDHSP--QGPPPSVLLHPL-HGPPGGHHHHHPLHLPTHPAALQLLSHYHQQQQQQQQQQHQQQQQ 525
            |..:|  |.|.|    :|: :|.|                     |.|.|...............
Zfish   165 GSGTPCVQRPAP----YPMSYGQP---------------------SSYSQGYGSSPYFSGLDCSP 204

  Fly   526 QHHQQQQQLSPSGCNPAANHL---SMGGERSAFRSLVSSPSAAAFLGLARQYAVAASLTVAEEQR 587
            .......|||.||  .|.:.|   ||||..|...||.|...:.|.||    ::....|...::|.
Zfish   205 YLSPMTTQLSASG--GALSPLTVPSMGGSLSQSPSLSSQGYSTASLG----FSSVDCLDYKDQQA 263

  Fly   588 SRLHYS 593
            .:|::|
Zfish   264 WKLNFS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197
Homeodomain 349..405 CDD:459649 29/55 (53%)
crxNP_694419.1 homeodomain 38..97 30/58 (52%)
Homeodomain 49..94 CDD:459649 23/44 (52%)
TF_Otx 152..230 CDD:427350 26/104 (25%)
Blue background indicates that the domain is not in the aligned region.

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