DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eyg and Pax8

DIOPT Version :9

Sequence 1:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_112403.2 Gene:Pax8 / 81819 RGDID:620434 Length:457 Species:Rattus norvegicus


Alignment Length:470 Identity:135/470 - (28%)
Similarity:190/470 - (40%) Gaps:148/470 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 IPPGFGGGGSTGGIPHGAGGPTGSTLNTLMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLL- 151
            |..|.||....||     ....|..|..::.| |:::.:. .|:|..||::.:....|.|||:| 
  Rat     6 IRSGHGGLNQLGG-----AFVNGRPLPEVVRQ-RIVDLAH-QGVRPCDISRQLRVSHGCVSKILG 63

  Fly   152 -----GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSS 211
                 ||:| ||:|||||||||||.||.||..|||:|||:||||||:||::||||.|.|.|||||
  Rat    64 RYYETGSIR-PGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127

  Fly   212 INRILRNRAAER--------VATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPS 268
            ||||:|.:..:.        |||:..         .|.|..          :|.....||..|.|
  Rat   128 INRIIRTKVQQPFNLPMDSCVATKSL---------SPGHTL----------IPSSAVTPPESPQS 173

  Fly   269 ALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENR 333
                                      .||.|.:.:.|..|      ...|||.:...::.:|:  
  Rat   174 --------------------------DSLGSTYSINGLLG------IAQPGSDNKRKMDDSDQ-- 204

  Fly   334 HIDSDYLDDDDE-----PKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSS---------- 383
              ||..|..|.:     |:......||....||.||..|::.|||     |..:|          
  Rat   205 --DSCRLSIDSQSSSSGPRKHLRTDTFGQHHLEPLECPFERQHYP-----EAYASPSHTKGEQGL 262

  Fly   384 ------RTSLSEARVQVWFSNR--RAKWRRHQRMNLLKRQRSSPANPLH-SQQSNDAPASSPTPS 439
                  .::|.:.:..:..||.  ......||...::    :.|.:|.. .|::.:..:||.|||
  Rat   263 YPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVV----ADPHSPYAIKQETPELSSSSSTPS 323

  Fly   440 NHSSASTSAPVAPVPPPQQPLPLCGDHSPQG---PPPSVLLH-----------------PLHGP- 483
            :.||::.           ..|...|...|.|   ||.:...|                 .:.|| 
  Rat   324 SLSSSAF-----------LDLQQVGSGGPAGASVPPFNAFSHAASVYGQFTGQALLSGREMVGPT 377

  Fly   484 -PGGHHHHHPLHLPT 497
             ||     :|.|:||
  Rat   378 LPG-----YPPHIPT 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eygNP_001014582.1 HTH 120..217 CDD:304362 59/102 (58%)
Homeobox 352..404 CDD:278475 15/69 (22%)
Pax8NP_112403.2 PAX 9..133 CDD:128645 67/131 (51%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68 16/62 (26%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 34/47 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..226 19/112 (17%)
Pax2_C 344..455 CDD:289189 11/49 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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